Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  410 bits (1053), Expect = e-119
 Identities = 229/522 (43%), Positives = 326/522 (62%), Gaps = 5/522 (0%)

Query: 21  LPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLALLFGVPSAWLIAMCKL 80
           +PILAIF+ A   S E + HLLA V+P   F T +L          FG+  AWL+   + 
Sbjct: 1   MPILAIFWLALTGSTEGWQHLLANVLPRAGFRTFILLGLTAATTAFFGIVCAWLVTTFEF 60

Query: 81  PGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGWQA-GSYWFPDIRSLG 139
           P  R L  ALVLPLA+P+Y+  Y F  + D+ GP+Q A+R   G+ +   YWFPDIRSLG
Sbjct: 61  PLRRILSAALVLPLAIPSYLAAYAFGEFLDFTGPVQSAVRAAFGYHSIRDYWFPDIRSLG 120

Query: 140 GASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFRRISLPLARPAIAVGL 199
           GA +VL+ VLYPYVYL  RAA   Q     ++AR L   P   F  + LP+ARPAIA+GL
Sbjct: 121 GAVIVLSSVLYPYVYLSARAALSMQGRFAAEAARTLGAKPLNVFFSVQLPMARPAIAIGL 180

Query: 200 SLVAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAIMLVMVLLLLSSERYS 259
           SLV MET+ D G V    V TLT  +Y+TWL   NL  A +I+A++L++V  L+  ER +
Sbjct: 181 SLVLMETLNDIGAVEYLGVQTLTFTIYETWLNRGNLANATQIAAVILIIVSALIVIERNA 240

Query: 260 RRRQKLYQTQFNSHEEYRYTLK---GWRLWAALIWCWGLVAVAFILPLLQLISYAWTYFA 316
           R +Q+    +  S  + R+ LK   GWR W A ++C+  VA  F +P++ L  YA     
Sbjct: 241 REKQRFGAPKATSMAQ-RHRLKALAGWRRWCASLFCFLPVASGFFIPVIVLGGYAAKRLD 299

Query: 317 QSWTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVALMRLSSMGYAVPGT 376
             +  +  +   +S  VS+SAA + ++ A V ++  R + +R S    RL SMGY VPGT
Sbjct: 300 ALFQPKLLKALGHSLEVSLSAAFLTLIAAFVFSYAIRTERSRLSKVAARLGSMGYGVPGT 359

Query: 377 VLAIGILVPVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVRFSAVAIGSIESSL 436
           VLAIG+L+P+ +LD+ ++   +       GL+ SG+ FAI++A  VRF  +A G++++  
Sbjct: 360 VLAIGVLIPLASLDNGVDGFIRSHFGFSSGLLLSGTAFAIIYAHAVRFMTMAEGTLDAGF 419

Query: 437 SKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMKELNAAILLRPFNF 496
            K+SP +DMA+R++G +  Q L +V LP +R  AL A LLV IESMKEL A ILLRPF F
Sbjct: 420 HKLSPHIDMASRSLGRNRAQTLFKVLLPNMRPAALTAFLLVLIESMKELPATILLRPFGF 479

Query: 497 ETLATYVYNYASDERLELAALPAILLVLVGLIPLVMVNRSLE 538
            TLAT VY  AS  R++ AA+PAI++++ GLIP+++V++S++
Sbjct: 480 NTLATLVYEDASRSRVQDAAVPAIIIIMAGLIPVLLVSKSMD 521