Pairwise Alignments

Query, 541 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  355 bits (912), Expect = e-102
 Identities = 203/532 (38%), Positives = 313/532 (58%), Gaps = 2/532 (0%)

Query: 6   FAWKASSLVLTTLLVLPILAIFYTAFGNSDEVFAHLLATVMPTYIFNTLVLTCSVLLLAL 65
           F W   SL+     ++P+LA+   A   S+ ++ HL ATV+ T + +T +L   V LLA 
Sbjct: 21  FWWLGLSLLAVCGAMVPVLALVSQAVQGSEGLWDHLGATVLWTALPDTAILLAGVGLLAG 80

Query: 66  LFGVPSAWLIAMCKLPGERWLQWALVLPLAMPAYIIGYLFTHWFDYAGPIQIALRDWTGW 125
           + G  +AWL+     PG R L+WAL+LPLAMP YI+ Y +       GP+Q A+R   G+
Sbjct: 81  VVGTSAAWLVTAYDFPGRRVLEWALLLPLAMPTYIVAYAYLDILHPIGPVQGAIRWLLGY 140

Query: 126 QAG-SYWFPDIRSLGGASVVLALVLYPYVYLLCRAAFMEQNVTLLQSARLLKCSPWQSFR 184
            +   +  PDIRS  G  V+L  VL+PYVY+  RA F+ Q   LL+ AR L  S   +F 
Sbjct: 141 SSPREFRLPDIRSTVGCIVLLGFVLFPYVYIPVRAMFLTQAGNLLEVARTLGVSRRAAFF 200

Query: 185 RISLPLARPAIAVGLSLVAMETIGDFGTVSLFAVNTLTTAVYDTWLGYSNLNAAAKISAI 244
           ++++PLARPAIAVG+SL  ME + D G      V TLT +VY TW+  S+L  AA+I+  
Sbjct: 201 KVAVPLARPAIAVGVSLALMEALNDIGASEFLGVRTLTVSVYTTWVTKSDLPGAAQIALS 260

Query: 245 MLVMVLLLLSSERYSRRRQKLYQTQFNSHEEYRYTLKGWRLWAALIWCWGLVAVAFILPL 304
           ML +V+ L++ ER++RR+Q+   +   S E     L G R WAA       V + F+ P 
Sbjct: 261 MLFIVVALVALERWARRKQRYSVSAQKSRELEPLRLTGPRGWAAFTLGSLPVLIGFVGPA 320

Query: 305 LQLISYAWTYFAQS-WTTQFKEYAINSFTVSISAAVVAVLVALVANFYARLQNNRTSVAL 363
             L+  AW  F  S  + +F + A+N+   +  A ++ +++ L   +  RL   R S+  
Sbjct: 321 SYLVIEAWKRFRFSGLSVRFADEAVNTIVFAGLATLITLILGLAVAYAMRLAPGRLSLWS 380

Query: 364 MRLSSMGYAVPGTVLAIGILVPVLALDHLINDIAKMMEWGRPGLVFSGSLFAIVFALVVR 423
            RLS++GYA PGTV+AIG+L+ +   D  ++   +       GL+F GS  A+++A   R
Sbjct: 381 YRLSTVGYAAPGTVIAIGVLIALGGFDRFVDQTMRDWFGISTGLIFIGSGAALIYAYSAR 440

Query: 424 FSAVAIGSIESSLSKVSPSLDMAARTMGCHANQMLKRVHLPLIRRGALIAGLLVFIESMK 483
           F  +A G +++ LS++  S D A+RT+G  A Q  +++HLPL +     A LL+F++ +K
Sbjct: 441 FLTIAAGGVDAGLSRIPHSFDHASRTLGRSATQTFRQIHLPLSKASLAAAALLIFVDCVK 500

Query: 484 ELNAAILLRPFNFETLATYVYNYASDERLELAALPAILLVLVGLIPLVMVNR 535
           EL A +LLRP NFET AT++Y  A+    E A++ A+ +V++G++P+V++ R
Sbjct: 501 ELPATLLLRPLNFETFATHLYGEAARGTYEEASIAALAIVVIGMLPVVLLAR 552