Pairwise Alignments

Query, 337 a.a., iron ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., putative protein from Xanthobacter sp. DMC5

 Score = 55.1 bits (131), Expect = 3e-12
 Identities = 71/305 (23%), Positives = 130/305 (42%), Gaps = 35/305 (11%)

Query: 1   MKKLLSLSAITLSVLAPSAFA------AQEVNVYSYRQPFLIEPMFAEF-------TKET 47
           M+ L +LSA+TLSVL  +A A      A   +   Y  P    P +A++         +T
Sbjct: 1   MRHLKTLSAVTLSVLTLAAVAVAPARPAAAADAICYNCP----PEWADWGAMLKAIKADT 56

Query: 48  GIKV--NVKFAKEGIAEKLAQEGEYSPADVILTSEFSRLFELTEKGLTQPLDSKVIEENI 105
           GI V  + K + + +A+ LA++   SP   +     +   +  + G+TQP + K   + I
Sbjct: 57  GIDVPQDNKNSGQSLAQILAEKA--SPVADVAYLGVTFGIKAKDAGVTQPYEPKGFAD-I 113

Query: 106 PAQYRDSGDEWFALTQRTRSVYSSRDRLGKLGDDFDYMDLAKPEFKGKICTRSGKHPYNI 165
           P   +D    WF +   T  ++ ++D LG       + DL KPE+KG +        + +
Sbjct: 114 PEGLKDKDGNWFTIHSGTLGLFVNKDALGGAPVPACWADLLKPEYKGLVGYLDPTSAF-V 172

Query: 166 ALVASIIANHGEA----EAKAWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYL 221
             V ++  N        + K  +E  K   A +P    +     +  G  ++ +   Y  
Sbjct: 173 GYVGAVAVNGAMGGSFDDFKPGIEYFKKLQANQPIVPKQTSYARVVSG--EIPILFDYDF 230

Query: 222 GAMLNDQEQKSWAEAVYINFPGQNVQGTHVNVSGMAMAKYSPNRENAQKLMEFLTGETAQ 281
            A      +K     V         +G+ V    M + K +P+ E A+K+++++  +  Q
Sbjct: 231 NAYRAKYNEKGNFAFVI------PCEGSVVVPYVMTLVKGAPHPEAAKKVLDYVLSDKGQ 284

Query: 282 KMYAE 286
            M+A+
Sbjct: 285 AMWAK 289