Pairwise Alignments

Query, 409 a.a., ammonium transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Ammonia channel from Pseudomonas sp. DMC3

 Score =  204 bits (520), Expect = 3e-57
 Identities = 147/416 (35%), Positives = 211/416 (50%), Gaps = 38/416 (9%)

Query: 3   LSITVTELRYALDTFFFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNFVLYAIACT 62
           L   V  L ++ +T F LI   +V+ M AGFA LE G VR KN    L K    +A++  
Sbjct: 4   LQSAVDSLVHSSNTLFILIGAVMVLAMHAGFAFLEVGTVRQKNQVNALAKILSDFAVSTL 63

Query: 63  TYLIVGYNIMYVDNTEGGWLPSFGALIGSQADGADHSLE-SDFFFQVVFVATAMSVVSGA 121
            Y  +GY I Y     G       A++      ADH      FFF + F A   +++SG 
Sbjct: 64  AYFFIGYWISY-----GVTFMQPAAVL-----TADHGYGLVKFFFLLTFAAAIPAIISGG 113

Query: 122 VAERMKLWAFLIFSAVLTAFIYPVEGYWTWGG-----GFLSA---AGFSDFAGSGIVHLA 173
           +AER +    L  +A++ AFIYP      W G     G+L+A   A F DFAGS +VH  
Sbjct: 114 IAERARFVPQLCATALIVAFIYPFFEGLIWNGNFGLQGWLAAQFGAAFHDFAGSVVVHAV 173

Query: 174 GASAALAGVLLLGARKGKYGKNGEIYPIPGSNMPLATLGTFILWFGWFGFNGGSQLMVSD 233
           G   ALA VLLLG R G+Y ++G +     S++P   LG++IL  GWFGFN  S   +  
Sbjct: 174 GGWLALAAVLLLGPRNGRY-RDGRLVAFAPSSIPFLALGSWILIVGWFGFNVMSAQTLQG 232

Query: 234 FENATSVGKIFLNTNAAAAAGAIAALLVCKTTWGKADLTMVLNGALAGLVAITADPLSPS 293
                  G + +N+  A   G +AAL+V     G+ D   + NG LAGLVAI A      
Sbjct: 233 VS-----GLVAVNSLMAMVGGTVAALIV-----GRNDPGFLHNGPLAGLVAICAGSDLMH 282

Query: 294 PLYSVAIGAVSGSLVVFSIIGLD-KLKIDDPVGAISVHGVCGFFGLMVVPLSNADATFG- 351
           P+ ++  GA++G+L V+       K +IDD +G   +HG+CG +G +   +    A  G 
Sbjct: 283 PVGALVTGAIAGALFVWCFTAAQVKWRIDDVLGVWPLHGLCGVWGGIACGIFGQSALGGL 342

Query: 352 ------AQLLGAAVIFAWVFGASLVVWGVLKATMGIRVSEEEEMEGMDMHDCGVGA 401
                 +QL+G A+  A       VV+G +KA  G+R+S+E+E  G D+    +GA
Sbjct: 343 GGVSLISQLIGTALGVAVALVGGFVVYGAIKALHGLRLSQEQEYYGADLSLHKIGA 398