Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 807 a.a., Penicillin-binding protein 1A from Xanthobacter sp. DMC5

 Score =  162 bits (409), Expect = 9e-44
 Identities = 93/251 (37%), Positives = 146/251 (58%), Gaps = 9/251 (3%)

Query: 178 EQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVV---NLKAGRTVQGGST 234
           ++RL++     P ++++A L  ED++FY+H G+ P  I RA +    N       QG ST
Sbjct: 68  QRRLYIPIQSVPRLVIEAFLSAEDKNFYEHGGIDPTGIFRAALTFAQNYGKNVRAQGAST 127

Query: 235 LTQQLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGF 294
           +TQQ+AKN  L+++R+L RK++EA +AL I+  YSKDRILE YLNE+YLG       +G 
Sbjct: 128 ITQQVAKNFLLTNERSLDRKIKEALLALRIERAYSKDRILELYLNEIYLGMGA----YGI 183

Query: 295 GLASRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILT 354
             A+ +YF + + EL + ++A L  + K PS YNP R   RA +RR+ V+  M+E+  ++
Sbjct: 184 AAAALVYFDKSVDELNVQEVAYLAALPKAPSNYNPFRERNRATDRRNWVIDRMVENGFVS 243

Query: 355 APEYQQAVTRPLDVQKTAQIASRQPA--YFQQVSIELKEKLGDKFKADSGLRVFTSLDPV 412
             E + A    L+V   A  A    A  Y ++V  ++ E+ G++   + GL V T LDP 
Sbjct: 244 QQEGEAAKRAQLEVTPRATGAQIFAAEYYAEEVRRQIYERYGERKLYEGGLSVRTPLDPK 303

Query: 413 SQSKLEQAIHD 423
            Q   ++ + D
Sbjct: 304 LQVLAKKTLTD 314



 Score =  131 bits (330), Expect = 1e-34
 Identities = 97/317 (30%), Positives = 144/317 (45%), Gaps = 30/317 (9%)

Query: 436 LEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYNL 495
           +E A + ++  +G + A+ GG       FNR   A RQ GS  KP VY  AL   + Y  
Sbjct: 433 VEGAMVVMEPTTGRVLALSGGFSYDESQFNRATQAMRQPGSSFKPIVYSAAL--DNGYTP 490

Query: 496 ATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQVSA 555
           +T + D P  L+      W P NY ++Y G   L   L QS NV TV L   +G+  ++ 
Sbjct: 491 STIVVDAPFELEQQGQDTWRPENYSKKYYGPQTLRFGLEQSRNVMTVRLANDVGMPIIAE 550

Query: 556 TLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGNVL 615
              + G+  D++ P  +M LGS   T  ++   Y  + N G+K   S +  + D  G+ +
Sbjct: 551 YAKRFGIY-DDMPPYLAMALGSGETTLMRMTGAYAMIANGGRKVTPSLIDRIQDRYGHTI 609

Query: 616 Y---------------ESLPRVSQ------AVDQQAAWLTTYAMKQGVQEGTGRYLNAQF 654
           Y               E+ P  S        +D   A+  T  M+  VQ GTG  L    
Sbjct: 610 YRHDERECRGCEATKWENQPEPSLIDRRPVVLDPMTAYQITSMMEGVVQRGTGTALKEL- 668

Query: 655 SSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASGALR--VYAQYLK 712
               +AGKTGTTND +D+WF+G     V  I+LG D  +P       G L   +   ++K
Sbjct: 669 -GKPIAGKTGTTNDEKDAWFIGFTPEIVVGIYLGYDKPKPMGKGSTGGLLSAPIARDFMK 727

Query: 713 YRIPEKLQLPW--PEGI 727
             I ++  +P+  P GI
Sbjct: 728 VAIADRPAIPFRVPAGI 744