Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 694 a.a., Penicillin-binding protein 1C from Xanthobacter sp. DMC5

 Score =  192 bits (488), Expect = 5e-53
 Identities = 169/525 (32%), Positives = 243/525 (46%), Gaps = 58/525 (11%)

Query: 192 LVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLSSDRTL 251
           LVD +L  EDR F  H GV  LA+ RA      + R V GGSTLT Q+A+       RTL
Sbjct: 89  LVDMILAYEDRRFRDHMGVDALALLRAAGQAAGSLRVVSGGSTLTMQVARLTLPPRARTL 148

Query: 252 WRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPLQELRI 311
             KL +   AL ++ R SKD IL  YL     G +    I G   AS  Y G+  + L +
Sbjct: 149 NAKLAQMRRALELEARLSKDEILSLYLTLAPYGGN----IEGVRAASLTYLGKEPRRLTL 204

Query: 312 DQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPLDVQKT 371
            + ALLV + + P    P RY  RA+  RD VL  +    I+   E + A          
Sbjct: 205 GEAALLVALPQSPETRRPDRYPARAKAARDRVLDRLAAQGIIAPDEVRVA---------K 255

Query: 372 AQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQIPQLAKT 431
           A+          Q++  L E++  + + D   R  T+LD   Q +LE+ + ++     +T
Sbjct: 256 AEAVPTARRLLPQIAPHLSEEMAAE-RPDLA-RHLTTLDAPLQERLEELVRER----TRT 309

Query: 432 AGKDLEAAAIAVDRHSGEIRAMVGGKRTGYD----GFNRVLNASRQIGSLVKPAVYLTA- 486
            G+ L AA + +D  S E+RA V      +D    G   +  A R  GS +KP +Y  A 
Sbjct: 310 LGRGLSAAIVVMDNESAEVRAYVAA-AVYFDRDRAGAVDLARAVRSPGSTLKPFIYALAF 368

Query: 487 ---LAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVA 543
              +AHP+     T +ED+P     +   AW P N+DR ++G + +  AL  SLNVP V 
Sbjct: 369 EDGIAHPE-----TLIEDRP-----ARFGAWRPENFDRTFQGTLSVRKALQLSLNVPAVR 418

Query: 544 LGMKLGIDQVSATLGKLGVNRDEI----RPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKA 599
           L   +G  ++++ + + G  R E+     P   M LG   +    +  +Y  L   G+  
Sbjct: 419 LLEAVGPQRLASRMQQAG-GRLELPPGAAPALPMGLGGVGIRLIDLTTLYAALARGGEAH 477

Query: 600 PLSALRSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAAL 659
                R     +G V   + PR ++ VD+ AAW     +      GT    NA      +
Sbjct: 478 APVFRRG----DGAV---AAPRKARLVDEVAAWYVGQCLL-----GTPAPENA--LGGRI 523

Query: 660 AGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPT-KLTGASGA 703
           A KTGT+   RDSW VG DGR    +W+GR D Q    LTG + A
Sbjct: 524 AFKTGTSYGYRDSWAVGFDGRRTVGVWVGRPDGQAVPDLTGRAAA 568