Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 757 a.a., Biosynthetic peptidoglycan transglycosylase from Xanthobacter sp. DMC5

 Score =  263 bits (672), Expect = 3e-74
 Identities = 180/553 (32%), Positives = 283/553 (51%), Gaps = 30/553 (5%)

Query: 186 DQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFL 245
           +  P+ L+ A L TEDR FY+H G+      RA+V N +AG   QGGS+L+QQLAKN+FL
Sbjct: 141 EDIPDNLIKATLATEDRRFYEHWGIDVAGTARALVTNARAGGVRQGGSSLSQQLAKNLFL 200

Query: 246 SSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQP 305
           S++RT+ RK++EA++A+ ++ R +K +IL+ YL+  YLG  GA   +G   A+R YFG+ 
Sbjct: 201 SNERTIERKIKEAFLAIWLEARLTKSQILKLYLDRAYLG-GGA---YGVDAAARYYFGKS 256

Query: 306 LQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRP 365
           ++E+ + + A+L G+ K PS Y P      AR R   VL  ++E   +T  +   A   P
Sbjct: 257 VKEVNLAEAAMLAGLFKAPSKYAPHINLPAARARASTVLDNLVEAGFMTEGQVFGARRNP 316

Query: 366 LDVQKTAQIASRQPAYFQQVSIELKEKLGDKFK---ADSGLRVFTSLDPVSQSKLEQAIH 422
                  +     P ++   +    +KL ++      +    V T LDP  Q   + A+ 
Sbjct: 317 --ATPVDRRDDEVPDFYLDYAFGEVKKLVEQLPPSVIERNFIVRTGLDPNIQKVADAALE 374

Query: 423 DQIPQLAKTAGKD--LEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKP 480
             + +     G+D  ++  +I V   +G +RA+VGG+  G   FNR  +A RQ GS  KP
Sbjct: 375 SSLNEF----GRDYKVKQGSIVVMEPNGTLRALVGGRDYGESQFNRATDALRQPGSSFKP 430

Query: 481 AVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVP 540
            VY  AL   + Y  +T ++D P+ L       W P+NY R Y G + L  AL  SLN  
Sbjct: 431 YVYTVALM--NGYRPSTIVQDAPICL-----GNWCPQNYGRSYMGSITLKTALQHSLNTV 483

Query: 541 TVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAP 600
            V L  + G  ++     ++G+ R  +     + LG+  +T +     Y    N GK   
Sbjct: 484 AVRLAERFGRKKIVDLAHQMGI-RTPLPISAPLPLGAAEVTLFDATTAYSVFANGGKSVY 542

Query: 601 LSALRSVLDLEGNVLY---ESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSA 657
             A+  +    G+V++      P+  Q + QQA +     +   V+ GTGR   A+  +A
Sbjct: 543 PHAVVEMRIGNGDVIWRFDRDAPKPVQIIPQQALYDINDMLNNVVENGTGR--RARLPNA 600

Query: 658 ALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQ-PTKLTGASGALRVYAQYLKYRIP 716
            +AGKTGTTN  RD+WF+G  G  V  +W G DD     K+TG +     + + + Y   
Sbjct: 601 KVAGKTGTTNAYRDAWFMGFTGNYVCGVWFGNDDYAVMNKMTGGTLPAMTWQKVMAY-AH 659

Query: 717 EKLQLPWPEGITT 729
           + +++    G+TT
Sbjct: 660 QGIEIKPIPGVTT 672