Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 741 a.a., Biosynthetic peptidoglycan transglycosylase from Xanthobacter sp. DMC5

 Score =  292 bits (747), Expect = 5e-83
 Identities = 192/555 (34%), Positives = 296/555 (53%), Gaps = 22/555 (3%)

Query: 187 QFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLS 246
           + P  L  A +  ED+ FY H G+ P  + RA+V NL + R  QGGSTLTQQLAKN+FL+
Sbjct: 155 ELPPYLPKAFVAIEDQRFYSHFGLDPEGLARALVTNLTSRRLRQGGSTLTQQLAKNLFLT 214

Query: 247 SDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPL 306
            +RT  RK++E  +AL +++++SKD++L+ YLN VY G +GA   +G   A++ YFG+  
Sbjct: 215 QERTASRKMQELVLALWLEHKFSKDQLLDLYLNRVYFG-AGA---YGVEAAAQRYFGKSA 270

Query: 307 QELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPL 366
           +++ + + A+L G+V  PS   P R  + A+ R +LVL  M +  +++A     A  RP 
Sbjct: 271 RQVTLAEAAMLAGLVNSPSRLAPTRNLKGAQTRANLVLAAMRDQKMISADMASTAQARPA 330

Query: 367 DVQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQIP 426
            + ++  +          V  +L   LGD  +    + V T++DP  Q   E A+ D   
Sbjct: 331 QLARSG-MPDSSGYVADWVMDQLDSVLGDG-ELPGDVTVRTTIDPALQKAGEAALED--- 385

Query: 427 QLAKTAGK-DLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLT 485
            LAK+  K  +   AI V    G ++A++GG+      +NR + A RQ GS  KP +YLT
Sbjct: 386 TLAKSGTKYGVGQGAIVVLDPDGGVKALIGGRSYADSQYNRAVTARRQPGSAFKPFIYLT 445

Query: 486 ALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALG 545
           A+ H    N  +  ED P+ LKG     W P N  R YRG V L  ALA SLN  +V L 
Sbjct: 446 AVEH--GLNPESVREDAPIQLKG-----WRPENSTRDYRGPVTLTTALALSLNTVSVRLV 498

Query: 546 MKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALR 605
           ++ G   V  T  ++G++   + P PS+ LG+  ++  ++A  Y    N G       + 
Sbjct: 499 LEFGPKAVVQTAHRMGIS-SNLDPNPSIALGTSEVSVLELAGAYTPFANGGLGVMPHVID 557

Query: 606 SVLDLEGNVLYE-SLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGKTG 664
           SV+  +G  LYE ++  + + V  +   +  + M Q +  GT R   A       AGKTG
Sbjct: 558 SVIGPDGKPLYERNVTGMGRVVASEYVAMMNHMMTQTLATGTAR--RADLPGWEAAGKTG 615

Query: 665 TTNDNRDSWFVGVDGREVTTIWLGRDDNQPT-KLTGASGALRVYAQYLKYRIPEKLQLPW 723
           T+ D RD+WFVG   + VT +WLG DD+ PT K +GA+  + ++++ +K           
Sbjct: 616 TSQDYRDAWFVGYTAKYVTAVWLGNDDSSPTKKASGANLPVEIWSRVMKAAHQGVPVAEL 675

Query: 724 PEGITTFGFAKQTQG 738
           P G+ ++GF     G
Sbjct: 676 PGGLRSYGFGGNGYG 690