Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

 Score =  598 bits (1542), Expect = e-175
 Identities = 325/746 (43%), Positives = 463/746 (62%), Gaps = 9/746 (1%)

Query: 9   SRGRKARSGKSASSSKLQIWLGRIWSIGWKLALTLAAVLVFIGIYLDSMIKQRFEGQLFD 68
           +R R  RS K   S  L+ WLG  W++  KL L    VL    +YLD++++++F G+ + 
Sbjct: 2   TRTRSPRSRKKPPSRGLRPWLG--WAL--KLGLVGLVVLAGFAVYLDAVVQEKFSGKRWT 57

Query: 69  LPTVVYARILTLEPGNGLSLQELRNELDVLNYRKVAQPRFPGEYASSSSRIELIRRPFEF 128
           +P  VYAR L L  G  LS  +   ELD L YR+      PG  A S + ++L  R F+F
Sbjct: 58  IPAKVYARPLELFTGQKLSKDDFLTELDALGYRREPVSNGPGAAAVSGNTVDLNTRGFQF 117

Query: 129 ADGPEPDRRVMLTFDGSGLNKIESLEQKRELGYLRLEPKLMGMLEKDSPEQRLFLRRDQF 188
            +G E  + V + F G  + ++ SL   + L  +RLEP ++G +   + E R+ ++ DQ 
Sbjct: 118 YEGLEKAQPVRVRFSGDYVAELSSLNGSK-LPVVRLEPLMIGGIYPKNLEDRILIKLDQV 176

Query: 189 PEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLSSD 248
           P  L++ L+  EDRDFY H GVSP +I RA+ VN   G+  QGGSTLTQQL KN +L+++
Sbjct: 177 PPYLLETLVAVEDRDFYHHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQLVKNFYLTNE 236

Query: 249 RTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPLQE 308
           R+L RKL EA MA++++  YSK  ILEAYLNEV++GQ G  A+HGFGLAS+ +FGQPL E
Sbjct: 237 RSLTRKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQFFFGQPLSE 296

Query: 309 LRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPLDV 368
           L++ Q+ALLVGMVKGPSYYNP R  ERA ERR+LVL ++ +  + TA +   A   PL V
Sbjct: 297 LKLHQVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVAAAKKMPLGV 356

Query: 369 QKTAQIA-SRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQIPQ 427
               ++A S  P +   V  +L+E   D+   + GLR+FTS DP+ Q K E +++D   +
Sbjct: 357 TTRGKLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTFKR 416

Query: 428 LAKTAGKD-LEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTA 486
           L    G D +EAA +  +  +GE++AM+G ++  + GFNR L+A R IGSLVKPAVYLTA
Sbjct: 417 LTGRKGSDEVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKPAVYLTA 476

Query: 487 LAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGM 546
           L  P +Y L + L D PL++KG +G  WTP+N+DR+  G V LY  +A S N+ T  LG+
Sbjct: 477 LEKPSKYTLTSWLSDDPLSVKGGDGQVWTPQNFDRRSHGTVFLYQGIAHSYNISTSRLGL 536

Query: 547 KLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRS 606
           ++G+  V  T+ +LGV R E    PS+LLG+ ++TP +VA MYQTL N G   P+  +RS
Sbjct: 537 EVGVPNVLKTIARLGVTR-EFPAFPSILLGAGAMTPMEVATMYQTLANGGFNTPMRGIRS 595

Query: 607 VLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQF-SSAALAGKTGT 665
           VL  EG  L     ++ Q  D  + +L   AM++ ++EGTGR + +   ++  LAGKTGT
Sbjct: 596 VLTAEGEPLKRYPFQIQQRFDAGSIYLIQNAMQRVMREGTGRSVYSVLPANLTLAGKTGT 655

Query: 666 TNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASGALRVYAQYLKYRIPEKLQLPWPE 725
           +ND+RDSWF G     +  +WLGRDDN  T  TGA+GAL+V+  +++   P  L +P P+
Sbjct: 656 SNDSRDSWFAGFGQDVLAVVWLGRDDNGKTPFTGATGALQVWTSFMRKADPLPLNMPQPD 715

Query: 726 GITTFGFAKQTQGGLKLDCDNAFKLP 751
            I        T  G   +C  A ++P
Sbjct: 716 NIVQAWIDPHTGQGSDANCPGAVQMP 741