Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

 Score =  164 bits (415), Expect = 2e-44
 Identities = 88/244 (36%), Positives = 146/244 (59%), Gaps = 5/244 (2%)

Query: 178 EQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQ 237
           ++R+ L+ ++ P+ L++A++ TED  +Y+H G  P+ I RA    L +G   QG ST+TQ
Sbjct: 74  KRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTITQ 133

Query: 238 QLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLA 297
           QLA+N FLS+++ + RK++E ++A+ I+   SK  ILE YLN++YLG       +G G A
Sbjct: 134 QLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRS----YGVGAA 189

Query: 298 SRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPE 357
           ++ YFG+ +++L + ++AL+ G+ K PS  NP+   ERA  RR++VL+ M++   +T  E
Sbjct: 190 AQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAE 249

Query: 358 YQQAVTRP-LDVQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSK 416
           Y  A   P L     A+I    P   +     + E+ G++    SG+ V+T++D   Q  
Sbjct: 250 YDAARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRA 309

Query: 417 LEQA 420
             QA
Sbjct: 310 ANQA 313



 Score =  121 bits (303), Expect = 2e-31
 Identities = 85/289 (29%), Positives = 136/289 (47%), Gaps = 38/289 (13%)

Query: 439 AAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYNLATT 498
           A +A++  +G + A+VGG    ++ FNR   + RQ+GS +KP +Y  AL       LAT 
Sbjct: 444 AFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKG--LTLATL 501

Query: 499 LEDKPLTL-KGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQVSATL 557
           + D P+     S+G+AW P+N    Y G   L + LAQS NV  V +  ++G+D+    L
Sbjct: 502 INDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYL 561

Query: 558 GKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGNVLYE 617
            + G   D++    ++ LG+ SLTP Q+AQ +    N+G       +  V +  GN+ + 
Sbjct: 562 TRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFS 621

Query: 618 SLPRV-----------------------SQAVDQQAAWLTTYAMKQGV-----------Q 643
           + P+V                        + + +Q A+LT   +   +            
Sbjct: 622 AEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSSDTGW 681

Query: 644 EGTGRYLNAQFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDN 692
            GTG    A      + GKTGTTND++D+W+ G     V   W+G DD+
Sbjct: 682 NGTGWRAQA-LKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDH 729