Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 719 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  160 bits (405), Expect = 2e-43
 Identities = 168/559 (30%), Positives = 258/559 (46%), Gaps = 77/559 (13%)

Query: 195 ALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFL--------S 246
           AL+++ED+ FY+H GV   A+  A   NL   RT +G ST+T QLA  +          +
Sbjct: 75  ALVLSEDQRFYEHSGVDWRAVSAAAWSNLWNSRT-RGASTITMQLAALLDEPGGDLQRGA 133

Query: 247 SDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEV-YLGQS-GADAIHGFGLASRLYFGQ 304
             R L +KL +A  A  ++ R+ KD+ILEAYLN V + G+  G DA+      SR  FG+
Sbjct: 134 GGRRLTQKLGQAVAAQQLERRWRKDQILEAYLNLVPFRGELVGIDAL------SRTLFGK 187

Query: 305 PLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTR 364
               L   + A+   +V+ P+   P + A+RA      VL+LM     +   E +     
Sbjct: 188 AAHGLDEREAAVAAALVRAPNA-KPSQVAQRACG----VLQLMQAGTPVDCSELRILTDI 242

Query: 365 PLDVQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQ 424
            L  ++ A      P + +QV             A     V +++    Q    Q +   
Sbjct: 243 ALPTREFAASEGIAPHHARQV-----------LAAGPAQTVRSTVSAPLQRFAVQTLQRH 291

Query: 425 IPQLAKTAGKDLEAAAIAV-DRHSGEIRAMVGGK-----RTGYDGFNRVLNASRQIGSLV 478
           + +L    G++++  A+ V D  SGE+ A VG        +  DG    + A RQ GS +
Sbjct: 292 LRELK---GRNVQDGALVVLDNASGEVLAWVGSSGELSAASEVDG----VTALRQPGSTL 344

Query: 479 KPAVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLN 538
           KP +Y  A+A   +   A+ LED P  +  + G  + P+NYDR+++G V    ALA SLN
Sbjct: 345 KPFLYAQAIAER-RMTAASLLEDSPAAIPTTSG-LYIPQNYDRRFKGWVSARTALAASLN 402

Query: 539 VPTVALGMKLGIDQVSATLGKLGVNRDEIRPV--PSMLLGSFSLTPYQVAQMYQTLTNSG 596
           VP V   + +  D     LG LG+   E       S+ LGS  +    +   ++TL N G
Sbjct: 403 VPAVRTLVMVSPDAFHHQLGALGLPLREPAGYYGYSLALGSAEVPLLSLTNAFRTLANGG 462

Query: 597 KKAPLSALRSVLDLEGNVLYESLPRVSQAVDQQAAWLT----TYAMKQGVQEGTGRYLNA 652
           +  P+                S P+ + A+D +AA++     + A  +    GT   L  
Sbjct: 463 RYGPVG---------------SPPQATPAIDPRAAFIVGDILSDANARARTFGTDSLLAT 507

Query: 653 QFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPT-KLTGASGALRVYA--- 708
           +F +A    KTGT+ D RD+W VG   R    +W+G     P   ++G SGA  V+A   
Sbjct: 508 RFWTAV---KTGTSKDMRDNWAVGWSERYTVGVWVGNAGGAPMWDVSGTSGAAPVWATVM 564

Query: 709 QYLKYRIPEKLQLPWPEGI 727
           Q+L  R P +   P P G+
Sbjct: 565 QHLHARTPSRAPPP-PAGL 582