Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 785 a.a., penicillin-binding protein from Magnetospirillum magneticum AMB-1

 Score =  147 bits (371), Expect = 2e-39
 Identities = 154/542 (28%), Positives = 243/542 (44%), Gaps = 52/542 (9%)

Query: 186 DQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFL 245
           ++ PE +  A++  EDR F +H GV P+A+ RA +  L+ G    G ST+  Q+A+ +  
Sbjct: 62  ERVPERVAAAIIAIEDRRFGRHGGVDPIALVRAGIERLR-GDGRSGASTIAMQVAR-MQA 119

Query: 246 SSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQP 305
              RTL RKL EA  A ++  R+ +D +L  YL  V  G       HG   A+R Y  +P
Sbjct: 120 PGPRTLPRKLLEAATATLMVARHGRDEVLRHYLRLVPFGNGS----HGIAHAARWYLDKP 175

Query: 306 LQELRIDQLALLVGMVKGPSYYNPMRYAERAR--ERRDLVLKLMMEHDILTAPEYQQAVT 363
           +++L   ++A L  + + P   NP     +AR   R   +L  + E  ++ A E+  A  
Sbjct: 176 VEDLSWAEIAFLSAIPQAPGRMNPFTREGKARAVRRGHRILAHLHESGLMGAGEFALA-E 234

Query: 364 RPLDVQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHD 423
           R ++         R+PA      + L+  L    +A     V T+LD  +Q ++  A   
Sbjct: 235 RQIE-HLAIPRHGRRPAEMIHPVLRLQRALAAS-QAPVPPLVPTTLDLATQRRVHDAASR 292

Query: 424 QIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGK-----RTGYDGFNRVLNASRQIGSLV 478
           Q+P       +  + A + +DR S E+ A +G +     + G   F  V   SR  GS +
Sbjct: 293 QMPDWRSRGAE--QVAVVVMDRASREVLAWLGSESYFSPQAGAIDFTAV---SRSPGSAL 347

Query: 479 KPAVYLTALAHPDQYNLA--TTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQS 536
           KP +Y  AL   D+  +A  T L D P T        W   N D  Y G +    ALA S
Sbjct: 348 KPFIYALAL---DRGRIAANTILADLPET-------QWGIDNSDHDYLGPMLPRQALANS 397

Query: 537 LNVPTVALGMKLGIDQVSATLGKLGVNRDEIRPVPS----MLLGSFSLTPYQVAQMYQTL 592
            NVP V++  + G+D+    L  LG++ D  +        + +G+   T  ++ + Y  +
Sbjct: 398 RNVPAVSVLRQAGLDETHLFLSTLGLH-DNTQAASRFGLVLAVGAMPTTLERLMRAYGAI 456

Query: 593 TNSGKKAPLSALRSV-LDLEGNVLYESLPR-VSQAVDQQAAWLTTYAMKQGVQEGTGRYL 650
            + G+   L   R   L   G VL  +  R ++Q +   AA L T+             L
Sbjct: 457 ADDGRLMDLVWWRGQDLSPPGQVLSAATARQITQFLSDPAARLPTFPR-----------L 505

Query: 651 NAQFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTK-LTGASGALRVYAQ 709
            A  S   +A KTGT+   RD+W V      V  +W GR      + +TGA  + R+  +
Sbjct: 506 GASESGLPIAVKTGTSQGYRDAWAVAWTMDTVVGVWTGRARGTTMQAMTGAQSSARLAQE 565

Query: 710 YL 711
            L
Sbjct: 566 IL 567