Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 703 a.a., carboxypeptidase from Magnetospirillum magneticum AMB-1

 Score =  261 bits (666), Expect = 1e-73
 Identities = 186/529 (35%), Positives = 271/529 (51%), Gaps = 36/529 (6%)

Query: 192 LVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLSSDRTL 251
           +  A+L TEDR FY H GV P+ + RA+ VNL+AG TVQGGST+TQQLAKN+FL+ DR +
Sbjct: 143 IAQAVLATEDRRFYSHWGVDPIGLARALFVNLRAGHTVQGGSTITQQLAKNLFLTPDRNM 202

Query: 252 WRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPLQELRI 311
            RK++E  MAL ++ R+SK++IL  YLN VYLG        G   A++ YF    +++ +
Sbjct: 203 KRKVQEVLMALWLEKRFSKEQILGLYLNRVYLG----SGTFGVDAAAKRYFDVSARKVDV 258

Query: 312 DQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPLDVQKT 371
            Q A+L G++K PS Y+P+   E +R+R   VL  M++     A    Q     + V   
Sbjct: 259 YQAAVLAGLLKAPSRYSPLNDPEASRKRTSDVLANMVK-----AGYIDQKTADNVQVTGA 313

Query: 372 AQIASRQ-PA--YFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQIPQL 428
           AQ+  R  PA  YF    +   ++ G+   A   + V T++D   Q K+E  +   +   
Sbjct: 314 AQLVRRPIPAGRYFADWLMANLDQFGE--VAGKDIVVHTTMDIALQRKVEADLKTMM--A 369

Query: 429 AKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTAL- 487
              A  +    A+ V    G IRA+ GGK      FNR     RQ GS  KP VYLTA+ 
Sbjct: 370 GPGAKANASQGAVVVMSPDGAIRALTGGKDYDDSQFNRATQGLRQPGSSFKPFVYLTAME 429

Query: 488 --AHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALG 545
               PD       +EDKP+ L       W+P NY  +Y G + L  ALA+S+N   V L 
Sbjct: 430 MGRTPDD-----EVEDKPIRL-----GNWSPGNYTGKYLGPITLRQALAESVNTVAVRLV 479

Query: 546 MKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALR 605
            ++G  +V AT  +LG+  D +R   ++ LG+  ++  ++   Y  L N G       + 
Sbjct: 480 EEVGPGRVIATARRLGITSD-LRNDATLALGTSEVSLLELTTAYAALANGGYGVTSFGVS 538

Query: 606 SVLDLEGNVLYESL-PRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGKTG 664
            + D  G VLY+       Q V   A       M   V +G+G+   A      +AGKTG
Sbjct: 539 HITDPSGKVLYQRQGGGFGQVVSPAALSRMHDMMSAVVTQGSGK---AARLDRPVAGKTG 595

Query: 665 TTNDNRDSWFVGVDGREVTTIWLGRDDN--QPTKLTGASGALRVYAQYL 711
           TT D RD+WF+G     V  +W+G DD   +  K+TG     +++ Q +
Sbjct: 596 TTQDYRDAWFMGFTADYVAGVWMGNDDYRIEMKKVTGGGLPAQLWKQVM 644