Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 840 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  706 bits (1822), Expect = 0.0
 Identities = 381/772 (49%), Positives = 502/772 (65%), Gaps = 29/772 (3%)

Query: 1   MTRKSSNRSRGRKARSGKSASSSKLQIWLGRIWSIGWKLALTLAAVLVFIGIYLDSMIKQ 60
           M RK   + +GRK R  +           G +W +  KL +    +    G+YLD  I+ 
Sbjct: 43  MPRKG--KGKGRKPRGKR-----------GWLWLL-LKLFIVFVVLFAIYGVYLDQKIRS 88

Query: 61  RFEGQLFDLPTVVYARILTLEPGNGLSLQELRNELDVLNYRKVAQPRFPGEYASSSSRIE 120
           R +G+++ LP  VY R++ LEP   +S  E+   L+   YR V +   PGE+   ++ IE
Sbjct: 89  RIDGKVWQLPAAVYGRMVNLEPDMPVSKNEMVKLLEATQYRLVTKMTRPGEFTVQANSIE 148

Query: 121 LIRRPFEFADGPEPDRRVMLTFDGSGLNKIESLEQKRELGYLRLEPKLMGMLEKDSPEQR 180
           +IRRPF+F D  E   R  LTF    L  I +L+  R+ G+ RL+P+L+ ML   + EQR
Sbjct: 149 MIRRPFDFPDSKEGQVRARLTFSDGRLETIVNLDNNRQFGFFRLDPRLITMLSSPNGEQR 208

Query: 181 LFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLA 240
           LF+ R  FP++LVD LL TEDR FY+HDG+S  +IGRA++ NL AGRTVQG STLTQQL 
Sbjct: 209 LFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLV 268

Query: 241 KNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRL 300
           KN+FLSS+R+ WRK  EAYMALI+D RYSKDRILE Y+NEVYLGQSG + I GF LAS  
Sbjct: 269 KNLFLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLY 328

Query: 301 YFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQ 360
           YFG+P++EL +DQ ALLVGMVKG S YNP R  + A ERR+LVL+L+ +  I+    Y  
Sbjct: 329 YFGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQKIIDQELYDM 388

Query: 361 AVTRPLDVQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQA 420
              RPL VQ    + S QPA+ Q V  EL+ KLGDK K  SG+++FT+ D V+Q   E+A
Sbjct: 389 LSARPLGVQPRGGVISPQPAFMQMVRQELQAKLGDKIKDLSGVKIFTTFDSVAQDAAEKA 448

Query: 421 IHDQIPQLAKTAG-KDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVK 479
           + + IP L K     DLE A + VDR SGE+RAMVGG    Y G+NR + A R IGSL K
Sbjct: 449 VVEGIPALKKQRKLSDLETAMVVVDRFSGEVRAMVGGAEPQYAGYNRAMQARRSIGSLAK 508

Query: 480 PAVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQY--RGEVPLYLALAQSL 537
           PA YLTAL+ P+ Y L T + D P++L+   G  W+P+N DR+Y   G+V L  AL +S+
Sbjct: 509 PATYLTALSQPNLYRLNTWIADAPISLRQPNGQVWSPQNDDRRYSESGKVMLVDALTRSM 568

Query: 538 NVPTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGK 597
           NVPTV LGM LG+  V+ T  KLGV +D++ PVP+MLLG+ +LTP +VAQ +QT+ + G 
Sbjct: 569 NVPTVNLGMALGLPAVTDTWTKLGVPKDQLNPVPAMLLGALNLTPIEVAQAFQTIASGGN 628

Query: 598 KAPLSALRSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSA 657
           +APLSALRSV+  +G VLY+S P+  +AV  QAA+LT + M+Q VQ GTGR L A++   
Sbjct: 629 RAPLSALRSVIAEDGKVLYQSYPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPGL 688

Query: 658 ALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASGALRVYAQYLKYRIPE 717
            LAGKTGTTN+N D+WF G+DG +VT  W+GRD+NQPTKL GASGA+ +Y +YL  + P 
Sbjct: 689 HLAGKTGTTNNNVDTWFAGIDGSQVTITWVGRDNNQPTKLYGASGAMAIYQRYLANQTPT 748

Query: 718 KLQLPWPEGITTFGFAKQ----TQGGLKLDCDNAFKLPIW-DNQQQLKQQCE 764
            L L  PE +   G          GG++        LP+W D+   L QQ E
Sbjct: 749 PLVLTPPEDVVDMGVDYDGNFVCSGGMR-------TLPVWTDDPNTLCQQGE 793