Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 850 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  176 bits (446), Expect = 5e-48
 Identities = 92/249 (36%), Positives = 153/249 (61%), Gaps = 6/249 (2%)

Query: 178 EQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQ 237
           ++R+ +  DQ P  +++A + TED  FY+H G+ P+ I RA  V L +G   QG ST+TQ
Sbjct: 64  KRRIPVTLDQIPPEMINAFIATEDSRFYEHHGIDPVGIFRAASVALFSGHASQGASTITQ 123

Query: 238 QLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLA 297
           QLA+N FLS +RTL RK++EA++A+ I+   +K+ ILE YLN++YLG       +G G A
Sbjct: 124 QLARNFFLSPERTLMRKIKEAFLAIRIEQLLNKNEILELYLNKIYLGYRA----YGVGAA 179

Query: 298 SRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPE 357
           +++YFG+ + +L + ++A++ G+ K PS +NP+   +RA  RR++VL  M+    +T  +
Sbjct: 180 AQVYFGKTVDQLSLSEMAVIAGLPKAPSTFNPLYSMDRAIARRNVVLSRMLSEGYITQAQ 239

Query: 358 YQQAVTRPLDVQKTA-QIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSK 416
           Y QA + P+D    A +IA   P   + V  E+  + G+    D G R++T++    Q  
Sbjct: 240 YDQARSEPIDANYHAPEIAFSAPYLSEMVRQEMYNRYGESAYED-GYRIYTTITRKVQQA 298

Query: 417 LEQAIHDQI 425
            +QA+ + +
Sbjct: 299 AQQAVRNNV 307



 Score = 99.0 bits (245), Expect = 1e-24
 Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 3/190 (1%)

Query: 435 DLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYN 494
           ++ +A ++++  +G + A+VGG       FNR   A RQ+GS +KP +Y  A+       
Sbjct: 424 EVNSALVSLNPQTGAVLALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAM--DKGLT 481

Query: 495 LATTLEDKPLTL-KGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQV 553
           LA+ L D P++      GS W P+N   QY G + L   L QS NV  V     +G+D  
Sbjct: 482 LASMLNDVPISRWDAGAGSDWRPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYA 541

Query: 554 SATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGN 613
           +  L + G     I    S+ LGS S TP QVA+ Y  + N G       +  + + +G 
Sbjct: 542 AEYLQRFGFPAQNIVHTESLALGSASFTPMQVARGYAVMANGGFLIDPYFISKIENDQGG 601

Query: 614 VLYESLPRVS 623
           V++E+ P+++
Sbjct: 602 VIFEAKPKIA 611



 Score = 50.1 bits (118), Expect = 5e-10
 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 20/111 (18%)

Query: 645 GTGRYLNAQFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDN-QPTKLTGASGA 703
           GTG           + GKTGTTN ++D+WF G     VT++W+G DD+ +    T ASGA
Sbjct: 699 GTGWRAARDLKRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVWIGFDDHRRDLGRTTASGA 758

Query: 704 LR------------------VYAQYLKYRIPEKLQLPWPEGITTFGFAKQT 736
           ++                   Y + +   +PE+   P P GI T    + T
Sbjct: 759 IKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTP-PPGIVTVNIDRST 808