Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 880 a.a., penicillin-binding protein, 1A family from Kangiella aquimarina DSM 16071

 Score =  162 bits (410), Expect = 7e-44
 Identities = 103/340 (30%), Positives = 182/340 (53%), Gaps = 22/340 (6%)

Query: 179 QRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQ 238
           +R+ +  +Q P+  ++AL+ TED+ F++H GV    + R + V L +G   +G STLT Q
Sbjct: 67  RRVPVELEQVPQDFINALIATEDQRFFEHGGVDIQGLLRVIKVALFSGEFSEGASTLTMQ 126

Query: 239 LAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLAS 298
            A+N+FL+ D+ L RKL E ++A+ ++   SK+ ILE Y+N+V+         +G G A+
Sbjct: 127 TARNMFLTRDQRLQRKLVEMFLAIKMEEELSKEEILEIYVNKVHFSHRA----YGLGAAA 182

Query: 299 RLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEY 358
           ++Y+G+ L EL + Q A++ G++KG S YNP+   ERA +RR+LVL  M+E + +   EY
Sbjct: 183 QVYYGKDLTELTLPQAAMMAGLLKGESAYNPISNPERAFQRRNLVLSRMVEQNYIDQAEY 242

Query: 359 QQAVTRPLDVQK-TAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKL 417
           ++A+  PL  +K TA +    P   +   +++ EK G     + GL V T+++   Q   
Sbjct: 243 EEAIATPLSAKKHTADLDLEAPYVAEMARLDVIEKFGRDVAYNQGLIVQTTIESQQQKAA 302

Query: 418 EQAIHDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSL 477
            QA+ + + +  +  G   +   + ++  +   R          +G   +L+++  IG L
Sbjct: 303 SQALREGLLEYDRRHG--YKGPELILEEFNANDR----------EGLLTLLDSTPTIGPL 350

Query: 478 VKPAVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPR 517
           + PAV L      D+ ++    +D  L      G  W  +
Sbjct: 351 L-PAVVLNV----DEKSIEVLSKDNQLLKIEWPGLEWAAK 385



 Score =  119 bits (299), Expect = 5e-31
 Identities = 92/344 (26%), Positives = 151/344 (43%), Gaps = 51/344 (14%)

Query: 435 DLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYN 494
           +  A  +A+  H G I A+VGG     + FN V  A RQ GS +KP +Y  A A    + 
Sbjct: 426 EASAGFVALSPHDGSITALVGGFDFASNKFNLVTQARRQPGSNIKPFIY--AAAFSKGFT 483

Query: 495 LATTLEDKPLT-LKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQV 553
            A+ + D P   +  S    W P+N + +Y G   L + L +S+N  +  L   +G D  
Sbjct: 484 AASLVNDAPFVRVNESIDEVWRPQNDNLKYNGPTRLRIGLKRSINTISTRLIDAIGADYA 543

Query: 554 SATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGN 613
              L  LG+  + + P  S+ LG+ S TP ++A  Y  L N G +     ++ +    G+
Sbjct: 544 EQFLVNLGLPDEHMDPYQSLALGTASFTPLEMASAYAVLANGGYQVEPYYIKEISSSVGD 603

Query: 614 VLYESLPRV-------------------------------------SQAVDQQAAWLTTY 636
           +LY++ P +                                      Q VD + A++   
Sbjct: 604 ILYQASPMLVCDECEQMRIENQIREQKFSPEIRNEPALPMPEDRIAKQVVDPRDAFIIYD 663

Query: 637 AMKQGVQEGTGRYLNAQFSSAA-----LAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDD 691
            MK  +  GT     A+ +S+      LAGKTGT ND +D+WF G +   V + W+G  D
Sbjct: 664 MMKDVIHSGTATTQLARRNSSLLKRSDLAGKTGTANDYKDAWFSGFNRDLVASAWVGFSD 723

Query: 692 NQPT---KLTGASGALRVYAQYLKYRI---PEKLQLPWPEGITT 729
           ++ +      G   AL ++A +++  +   P K  +  P  ++T
Sbjct: 724 HRRSLGQYEYGGRAALPIWATFMEQVLEGTPSKEMIQPPGVVST 767