Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 838 a.a., bifunctional glycosyl transferase/transpeptidase from Erwinia amylovora T8

 Score =  712 bits (1837), Expect = 0.0
 Identities = 378/762 (49%), Positives = 501/762 (65%), Gaps = 22/762 (2%)

Query: 15  RSGKSASSSKLQIWLGRIWSIGWKLALTLAAVLVFIGIYLDSMIKQRFEGQLFDLPTVVY 74
           R  K     K + W G    +  KL L     +   G +LD  I+ R +G+++ LP  VY
Sbjct: 52  RKAKGRPVRKKRSWSG----LFIKLFLIFVVAMAAYGFWLDGQIRSRIDGKVWQLPATVY 107

Query: 75  ARILTLEPGNGLSLQELRNELDVLNYRKVAQPRFPGEYASSSSRIELIRRPFEFADGPEP 134
            R+++LEPG   + +EL   L+   YR+V +   PGE+   ++ IE+IRRPF+F D  E 
Sbjct: 108 GRMVSLEPGMSYNKKELIALLEGTQYRQVTRMTRPGEFTVQANSIEMIRRPFDFPDSKEG 167

Query: 135 DRRVMLTFDGSGLNKIESLEQKRELGYLRLEPKLMGMLEKDSPEQRLFLRRDQFPEVLVD 194
             R  L+F    L++I++LE  R+ G+ RL+P+L+ ML+  + EQRLF+ R  FP++LVD
Sbjct: 168 QIRARLSFSNDRLSEIKNLESGRDFGFFRLDPRLITMLQSPNGEQRLFVPRAGFPDLLVD 227

Query: 195 ALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLSSDRTLWRK 254
            L+ TEDR FYQHDG+S  +IGRA + N+ AGR VQGGSTLTQQL KN+FL+++R+LWRK
Sbjct: 228 TLVATEDRHFYQHDGISFYSIGRAFLANITAGRAVQGGSTLTQQLVKNLFLTNERSLWRK 287

Query: 255 LREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPLQELRIDQL 314
             EAYMALI+D RY KDRILE YLNEVYLGQ+G+D I GF LAS  YFG+P+ EL +DQ 
Sbjct: 288 ANEAYMALIMDARYGKDRILELYLNEVYLGQAGSDQIRGFPLASLYYFGRPVDELSLDQQ 347

Query: 315 ALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPLDVQKTAQI 374
           ALLVGMVKG S YNP R  + A ERR+LVL+L+ +  ++    Y     RPL VQ    +
Sbjct: 348 ALLVGMVKGASLYNPWRNPKLALERRNLVLRLLQQQKVIDEELYAMLSARPLGVQPKGGV 407

Query: 375 ASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQIPQLAKTAG- 433
            S QPA+ Q V   L+  LGDK K  SG+++FT+LDPVSQ   E+++ + IP L K  G 
Sbjct: 408 ISPQPAFMQMVRNGLQASLGDKVKDLSGVKIFTTLDPVSQDAAEKSVEEGIPALRKQRGL 467

Query: 434 KDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQY 493
            DLE A + VDR SGE+RAMVGG    + G+NR L A R IGSL KPA YLTAL+ PD Y
Sbjct: 468 NDLETAMVVVDRFSGEVRAMVGGADPQFAGYNRALQARRSIGSLAKPATYLTALSQPDVY 527

Query: 494 NLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQV 553
            L T + D PL LK   G  W P+N DR++ G+V L  AL  S+NVPTV LGM LG+ QV
Sbjct: 528 RLNTWIADNPLELKQPNGQVWKPQNDDRRFSGQVMLVDALTNSMNVPTVNLGMTLGLPQV 587

Query: 554 SATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGN 613
             T  +LG  +D+++PVPSMLLG+ +LTP +VAQ +QT+ + G +APLSALRSV+  +G+
Sbjct: 588 VDTWTRLGAPKDQLQPVPSMLLGALNLTPVEVAQAFQTIASGGSRAPLSALRSVIAEDGS 647

Query: 614 VLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGKTGTTNDNRDSW 673
           VLY+S P+  +AV  QAA+LT Y+M+Q V  GT R L A++  A LAGKTGTTN+  DSW
Sbjct: 648 VLYQSFPQSERAVPAQAAYLTLYSMQQVVDHGTARALGAKYPKATLAGKTGTTNNLVDSW 707

Query: 674 FVGVDGREVTTIWLGRDDNQPTKLTGASGALRVYAQYLKYRIPEKLQLPWPEGITTFGFA 733
           F G+DG+EVT  W+GRD+NQPTKL G +GA+++Y +YL+ + P  L L  PE I      
Sbjct: 708 FAGIDGKEVTITWIGRDNNQPTKLYGGTGAMQLYRRYLENQAPLPLLLNPPEDIAPM--- 764

Query: 734 KQTQGGLKLDCDNAF----KLPIW---------DNQQQLKQQ 762
                     CD+A     +LP+W           QQQ++QQ
Sbjct: 765 -NVDSAGNFVCDSASSSWRRLPVWTTDASALCQQQQQQVQQQ 805