Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 848 a.a., peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA from Erwinia tracheiphila SCR3

 Score =  176 bits (447), Expect = 4e-48
 Identities = 95/249 (38%), Positives = 152/249 (61%), Gaps = 6/249 (2%)

Query: 178 EQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQ 237
           ++R+ L+  + P VLV A + TED  FY+H GV P+ I RA  + + +G   QG ST+TQ
Sbjct: 64  KRRIPLKLQEMPPVLVKAFIATEDSRFYEHHGVDPIGIFRAASIAMVSGHASQGASTITQ 123

Query: 238 QLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLA 297
           QLA+N FLS +RTL RK++EA++AL I+   SKD ILE YLN++YLG       +G G A
Sbjct: 124 QLARNFFLSPERTLMRKIKEAFLALRIEQMMSKDEILELYLNKIYLGYRA----YGVGAA 179

Query: 298 SRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPE 357
           +++YFG+ + +L + ++A++ G+ K PS +NP+   ERA +RR++VL  M++   +T  +
Sbjct: 180 AQVYFGKSVDQLSLSEMAMIAGLPKAPSTFNPLYSPERALQRRNVVLSRMLDQHYITQAQ 239

Query: 358 YQQAVTRPLDVQ-KTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSK 416
           Y +A + PL        IA   P   + V  E+ ++ GD    D G +V T++    Q  
Sbjct: 240 YDEARSTPLVANYHVPVIAFSAPYLTEMVRQEMVKRYGDNAYND-GYKVTTTITRKLQLA 298

Query: 417 LEQAIHDQI 425
            ++++ D +
Sbjct: 299 AQKSVQDNV 307



 Score = 95.5 bits (236), Expect = 1e-23
 Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 3/190 (1%)

Query: 435 DLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYN 494
           D+ ++ +++D H+G I A+VGG       FNR   A RQ+GS +KP +Y  A+       
Sbjct: 424 DVNSSLVSLDPHNGAILALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDRG--LT 481

Query: 495 LATTLEDKPLTL-KGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQV 553
           LA+ L D P++      G+ W P+N    Y G + L   L QS NV  V     +G+D  
Sbjct: 482 LASILNDVPISRWDAGAGADWRPKNSPPTYDGPIRLRQGLGQSKNVVMVRAMRAMGVDYA 541

Query: 554 SATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGN 613
           +  L + G     I    S+ LGS + TP Q+ + Y  + N G       +  + + +G 
Sbjct: 542 AEYLQRFGFPAQNIVHTESLALGSAAFTPLQIVRGYAVMANGGFLVDPWFISKIENQQGI 601

Query: 614 VLYESLPRVS 623
            ++E  P+V+
Sbjct: 602 TVFEEKPKVA 611