Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 827 a.a., bifunctional glycosyl transferase/transpeptidase from Erwinia tracheiphila SCR3

 Score =  725 bits (1871), Expect = 0.0
 Identities = 387/789 (49%), Positives = 510/789 (64%), Gaps = 24/789 (3%)

Query: 7   NRSRGRKARSGKSASSSKLQIWLGRIWSIGWKLALTLAAVLVFIGIYLDSMIKQRFEGQL 66
           N  R    R+GK  S  + + WLG    +  K AL    V++  G YLD  I+ R +G++
Sbjct: 41  NEERQSVPRNGKGRSPRRRRGWLG----LFVKPALVFILVMIAYGFYLDGQIRSRIDGKV 96

Query: 67  FDLPTVVYARILTLEPGNGLSLQELRNELDVLNYRKVAQPRFPGEYASSSSRIELIRRPF 126
           + LP  VY R++ LEPG  L+   +   L+   YR+V +   PGE+    + IEL+RRPF
Sbjct: 97  WQLPAAVYGRMVNLEPGMSLNKSGMIALLEGTQYRQVTRMTRPGEFTVQGNSIELLRRPF 156

Query: 127 EFADGPEPDRRVMLTFDGSGLNKIESLEQKRELGYLRLEPKLMGMLEKDSPEQRLFLRRD 186
           +FAD  E   R  LTF   GLN+I++L+  R+ G+ RL+P+L+ ML+  + EQRLF+ R 
Sbjct: 157 DFADSKEGQIRARLTFSNDGLNEIKNLDSGRDFGFFRLDPRLITMLQSPNGEQRLFVPRA 216

Query: 187 QFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLS 246
            FP++LVD L+ TEDR FYQHDG+S  +IGRA + N+ AGR VQGGSTLTQQL KN+FL+
Sbjct: 217 GFPDLLVDTLVATEDRHFYQHDGISFYSIGRAFLANITAGRAVQGGSTLTQQLVKNLFLT 276

Query: 247 SDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPL 306
           ++R+LWRK  EAYMALI+D RYSKDRILE YLNEVYLGQ+G D I GF LAS  YFG+P+
Sbjct: 277 NERSLWRKANEAYMALIMDARYSKDRILELYLNEVYLGQAGNDQIRGFPLASLYYFGRPV 336

Query: 307 QELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPL 366
            EL +DQ ALLVGMVKG S YNP R    A ERR+LVL+L+ +  ++    Y     RPL
Sbjct: 337 DELSLDQQALLVGMVKGASLYNPWRNPTLALERRNLVLRLLQQQKVIDQELYDMLSARPL 396

Query: 367 DVQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQIP 426
            VQ    + + QPA+ Q V  EL+ KLGDK K  SG+++FT+LDP+SQ   E+A+ + +P
Sbjct: 397 GVQPKGGVITPQPAFMQMVRNELQAKLGDKVKDLSGVKIFTTLDPLSQDAAEKAVEEGVP 456

Query: 427 QLAKTAG-KDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLT 485
            L K  G  DLE A + VDR SGE+RAMVGG    + G+NR L A R IGSL KPA YLT
Sbjct: 457 ALRKQRGLNDLETAMVIVDRFSGEVRAMVGGADPQFAGYNRALQARRSIGSLAKPATYLT 516

Query: 486 ALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALG 545
           AL+ PD+Y L T + D P+ LK   G  W P+N DR++ G+V L  ALA S+NVPTV LG
Sbjct: 517 ALSQPDKYRLNTWIADNPIALKQPNGQIWKPQNDDRRFSGQVMLVDALAHSMNVPTVNLG 576

Query: 546 MKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALR 605
           M LG+ QV  T  +LGV +D+++PVP+MLLG+ +LTP +VAQ +QT+ + G +A LSA+R
Sbjct: 577 MTLGLPQVVDTWTRLGVAKDQLQPVPAMLLGALNLTPIEVAQAFQTIASGGNRAQLSAVR 636

Query: 606 SVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGKTGT 665
           SV+  +G VLY+S P+  +AV  Q A+LT YAM+Q  +EGT R L A+++ A LAGKTGT
Sbjct: 637 SVIAEDGTVLYQSFPQAERAVPAQTAYLTLYAMQQVAEEGTARALGARYAKAHLAGKTGT 696

Query: 666 TNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASGALRVYAQYLKYRIPEKLQLPWPE 725
           TN+  DSWF GVDG+EV   W+GRD+NQ TKL GASGA+++Y +YL  + P  L    PE
Sbjct: 697 TNNQIDSWFAGVDGKEVAITWIGRDNNQSTKLYGASGAMQIYRRYLDNQAPMPLLPTPPE 756

Query: 726 GITTFGFAKQTQGGLKLDCDNAFKLPIWD------------NQQQLKQQCENRPTE---- 769
            I                  +   LP+W              QQQL+QQ      +    
Sbjct: 757 DIAPMNVDSAGNFVCGSASSSWRSLPVWTTDANALCQQQQAQQQQLQQQQPQNEQKGSDG 816

Query: 770 ---WIKKLF 775
              WIK +F
Sbjct: 817 VAGWIKDMF 825