Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 850 a.a., penicillin-binding protein, 1A family from Enterobacter asburiae PDN3

 Score =  178 bits (451), Expect = 1e-48
 Identities = 96/249 (38%), Positives = 152/249 (61%), Gaps = 6/249 (2%)

Query: 178 EQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQ 237
           ++R+ L  +Q P V+V A + TED  FY+H GV P+ I RA  + L +G   QG ST+TQ
Sbjct: 64  KRRIPLTLNQIPPVMVKAFIATEDSRFYEHHGVDPVGIFRAASIALFSGHASQGASTITQ 123

Query: 238 QLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLA 297
           QLA+N FLS ++TL RK++E ++A+ I+   SKD ILE YLN++YLG       +G G A
Sbjct: 124 QLARNFFLSPEKTLIRKIKEVFLAIRIEQLLSKDEILELYLNKIYLGYRA----YGVGAA 179

Query: 298 SRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPE 357
           +++YFG+P+++L + ++A + G+ K PS +NP+   +RA  RR++VL  M+    +   E
Sbjct: 180 AQVYFGKPVEQLTLSEMATIAGLPKAPSTFNPLYSLDRATARRNVVLSRMLSEGYINQSE 239

Query: 358 YQQAVTRPLDVQKTA-QIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSK 416
           Y QA +  +D    A +IA   P   + V  E+  + GDK   D G RV+T++    Q  
Sbjct: 240 YDQARSDVIDANYHAPEIAFASPYLTEMVRQEMVTRYGDKAYED-GYRVYTTVTRKVQQA 298

Query: 417 LEQAIHDQI 425
            ++A+ + +
Sbjct: 299 AQEAVRNNV 307



 Score =  102 bits (253), Expect = 1e-25
 Identities = 62/190 (32%), Positives = 96/190 (50%), Gaps = 3/190 (1%)

Query: 435 DLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYN 494
           D+ +A ++++  +G I A+VGG       FNR   A RQ+GS +KP +Y  A+       
Sbjct: 424 DVNSALVSINPQNGAILALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAM--DKGLT 481

Query: 495 LATTLEDKPLTL-KGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQV 553
           LA+ L D P++      GS W P+N   +Y G + L   L QS NV  V     +G+D  
Sbjct: 482 LASILNDVPISRWDAGAGSDWQPKNSPAEYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYA 541

Query: 554 SATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGN 613
           +  L + G     I    S+ LGS S TP QVA+ Y  + N G       +  + + +G 
Sbjct: 542 AEYLQRFGFPAQNIVRTESLALGSASFTPLQVARGYSVMANGGFLIDPYFISKIENDQGG 601

Query: 614 VLYESLPRVS 623
           VL+E+ P+++
Sbjct: 602 VLFEAKPKIA 611