Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 841 a.a., penicillin-binding protein 1B from Enterobacter asburiae PDN3

 Score =  718 bits (1854), Expect = 0.0
 Identities = 375/770 (48%), Positives = 511/770 (66%), Gaps = 26/770 (3%)

Query: 6   SNRSRGRKARSGKSASSSKLQIWLGRIWSIGWKLALTLAAVLVFIGIYLDSMIKQRFEGQ 65
           + + +GRK R  +           G  W +  KL +    ++   G+YLD  I+ R +G+
Sbjct: 50  NGKGKGRKPRGKR-----------GWFWLL-LKLFIVFVVLMAIYGVYLDQKIRSRIDGK 97

Query: 66  LFDLPTVVYARILTLEPGNGLSLQELRNELDVLNYRKVAQPRFPGEYASSSSRIELIRRP 125
           ++ LP  VY R++ LEP   ++  E+   L+   YR+V++   PGE+   S+ IE+IRRP
Sbjct: 98  VWQLPAAVYGRMVNLEPDMSITKNEMVKLLEATQYRQVSKMTRPGEFTVQSNSIEMIRRP 157

Query: 126 FEFADGPEPDRRVMLTFDGSGLNKIESLEQKRELGYLRLEPKLMGMLEKDSPEQRLFLRR 185
           F+F D  E   R  LTFDG  L+ IE+++  R+ G+ RL+P+L+ ML   + EQRLF+ R
Sbjct: 158 FDFPDSKEGQVRARLTFDGDRLDTIENMDNNRQFGFFRLDPRLITMLSSANGEQRLFVAR 217

Query: 186 DQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFL 245
           + FP++LVD LL TEDR FY+HDG+S  +IGRA++ NL AGRTVQG STLTQQL KN+FL
Sbjct: 218 NGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFL 277

Query: 246 SSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQP 305
           SS+R+ WRK  EAYMA+++D RYSKDRILE Y+NEVYLGQSG + I GF LAS  YFG+P
Sbjct: 278 SSERSYWRKANEAYMAVLMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRP 337

Query: 306 LQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRP 365
           ++EL +DQ ALLVGMVKG S YNP R  + A ERR+LVL+L+ +  ++    Y     RP
Sbjct: 338 VEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQVIDQELYDMLSARP 397

Query: 366 LDVQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQI 425
           L VQ    + S QPA+ Q V  EL+ KLGDK K  SG+++FT+ D V+Q   E+A  + I
Sbjct: 398 LGVQPRGGVISPQPAFMQLVRQELQSKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGI 457

Query: 426 PQLAKTAG-KDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYL 484
           P L K     DLE A + VDR++GE+RAMVGG    + G+NR + A R IGSL KPA YL
Sbjct: 458 PALKKQRKLSDLETAMVVVDRNTGEVRAMVGGAEPQFAGYNRAMQARRSIGSLAKPATYL 517

Query: 485 TALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVAL 544
           TAL+ P+QY L T + D P++L+   G  W+P+N D+Q+ G+V L  AL +S+NVPTV L
Sbjct: 518 TALSQPNQYRLNTWIADAPISLRQPNGQVWSPQNDDKQFSGQVMLVDALTRSMNVPTVNL 577

Query: 545 GMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSAL 604
           GM LG+  +  T  KLGV++D++ PVP+M+LG+ +LTP +VAQ +QT+ + G +APLSAL
Sbjct: 578 GMSLGLPAIVDTWQKLGVSKDQLHPVPAMILGALNLTPIEVAQAFQTIASGGNRAPLSAL 637

Query: 605 RSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGKTG 664
           RSV+  +G+VLY+S P+  +AV  QAA++T + M+Q VQ GTGR L A++    LAGKTG
Sbjct: 638 RSVIAEDGSVLYQSFPQAERAVPAQAAYMTLWTMQQVVQRGTGRQLGAKYPGLHLAGKTG 697

Query: 665 TTNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASGALRVYAQYLKYRIPEKLQLPWP 724
           TTN+N D+WF G+DGREV   W+GRD+NQPTKL GASGA+ +Y +YL  + P  L L  P
Sbjct: 698 TTNNNVDTWFAGIDGREVVITWVGRDNNQPTKLYGASGAMSIYQRYLANQSPVPLNLVAP 757

Query: 725 EGITTFGFAKQTQ----GGLKLDCDNAFKLPIWD-NQQQLKQQCE-NRPT 768
           E I   G          GG++        LP+W  N   L QQ +  +PT
Sbjct: 758 EDIVDMGVDSSGNFVCGGGMR-------TLPVWTANPDSLCQQSQPEQPT 800