Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 850 a.a., peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA from Escherichia coli ECRC62

 Score =  171 bits (433), Expect = 2e-46
 Identities = 91/249 (36%), Positives = 151/249 (60%), Gaps = 6/249 (2%)

Query: 178 EQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQ 237
           ++R+ +  DQ P  +V A + TED  FY+H GV P+ I RA  V L +G   QG ST+TQ
Sbjct: 64  KRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIFRAASVALFSGHASQGASTITQ 123

Query: 238 QLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLA 297
           QLA+N FLS +RTL RK++E ++A+ I+   +KD ILE YLN++YLG       +G G A
Sbjct: 124 QLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEILELYLNKIYLGYRA----YGVGAA 179

Query: 298 SRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPE 357
           +++YFG+ + +L ++++A++ G+ K PS +NP+   +RA  RR++VL  M++   +T  +
Sbjct: 180 AQVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRAVARRNVVLSRMLDEGYITQQQ 239

Query: 358 YQQAVTRPLDVQKTA-QIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSK 416
           + Q  T  ++    A +IA   P   + V  E+  + G+    D G R++T++    Q  
Sbjct: 240 FDQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRYGESAYED-GYRIYTTITRKVQQA 298

Query: 417 LEQAIHDQI 425
            +QA+ + +
Sbjct: 299 AQQAVRNNV 307



 Score =  100 bits (249), Expect = 3e-25
 Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 3/190 (1%)

Query: 435 DLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYN 494
           ++ +A ++++  +G + A+VGG       FNR   A RQ+GS +KP +Y  A+       
Sbjct: 424 EVNSALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAM--DKGLT 481

Query: 495 LATTLEDKPLTL-KGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQV 553
           LA+ L D P++      GS W P+N   QY G + L   L QS NV  V     +G+D  
Sbjct: 482 LASMLNDVPISRWDAGAGSDWQPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYA 541

Query: 554 SATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGN 613
           +  L + G     I    S+ LGS S TP QVA+ Y  + N G       +  + + +G 
Sbjct: 542 AEYLQRFGFPAQNIVHTESLALGSASFTPMQVARGYAVMANGGFLVDPWFISKIENDQGG 601

Query: 614 VLYESLPRVS 623
           V++E+ P+V+
Sbjct: 602 VIFEAKPKVA 611



 Score = 51.2 bits (121), Expect = 2e-10
 Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 20/112 (17%)

Query: 644 EGTGRYLNAQFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPT-KLTGASG 702
           +GTG           + GKTGTTN ++D+WF G     VT++W+G DD++     T ASG
Sbjct: 698 QGTGWRAGRDLQRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVWIGFDDHRRNLGHTTASG 757

Query: 703 ALR------------------VYAQYLKYRIPEKLQLPWPEGITTFGFAKQT 736
           A++                   Y + +   +PE+   P P GI T    + T
Sbjct: 758 AIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTP-PPGIVTVNIDRST 808