Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 852 a.a., peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA from Dickeya dianthicola ME23

 Score =  175 bits (444), Expect = 8e-48
 Identities = 94/249 (37%), Positives = 154/249 (61%), Gaps = 6/249 (2%)

Query: 178 EQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQ 237
           ++R+ L+ DQ P  LV+A + TED  F++H GV P  I RA ++ L +G   QG ST+TQ
Sbjct: 64  KRRIPLKLDQIPPTLVNAFIATEDSRFFEHHGVDPQGIIRAAMIALTSGHASQGASTITQ 123

Query: 238 QLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLA 297
           QLA+N FLS +RTL RK++E ++A+ I+   +K+ ILE YLN++YLG       +G G A
Sbjct: 124 QLARNFFLSPERTLLRKIKEVFLAIRIEQTLTKEEILELYLNKIYLGYRA----YGVGAA 179

Query: 298 SRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPE 357
           +++YFG+P+++L + Q+A++ G+ K PS +NP+   +RA  RR++VL  M++ + +T  +
Sbjct: 180 AQVYFGRPVEQLTLAQMAMIAGLPKAPSTFNPLYSYDRAVARRNVVLSRMLDENYITQAQ 239

Query: 358 YQQAVTRPLDVQKTA-QIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSK 416
           Y QA    L     A +IA       + V  E+ ++ G+    D G +V+T++    Q  
Sbjct: 240 YDQARNEKLVADYHAPEIAFSASYLAEMVRQEMVKRYGEDAYND-GYQVYTTITRKLQQA 298

Query: 417 LEQAIHDQI 425
            E A+H+ +
Sbjct: 299 AEDAVHNNV 307



 Score =  103 bits (256), Expect = 5e-26
 Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 3/189 (1%)

Query: 435 DLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYN 494
           D+ +A ++++   G + A+VGG       FNR   A RQ+GS +KP +Y  A+       
Sbjct: 424 DVNSALVSLNPKDGAVLALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAM--DKGLT 481

Query: 495 LATTLEDKPLTL-KGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQV 553
           LAT L D P+T      GS W+P+N   +Y G++ L   L QS NV  V     +G+D  
Sbjct: 482 LATILNDAPITRWDPGAGSDWSPKNSPPEYDGQIRLRQGLGQSKNVVMVRAMRAMGVDYA 541

Query: 554 SATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGN 613
           +  L + G     I    S+ LGS S TP QV + Y  +TN G       +  + +  GN
Sbjct: 542 ADYLERFGFPEQNIVHTESLALGSASFTPLQVVRGYAVMTNGGYLVDPYFITKIDNASGN 601

Query: 614 VLYESLPRV 622
            ++ ++P++
Sbjct: 602 TVFTAIPKI 610