Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 794 a.a., multimodular transpeptidase-transglycosylase PBP 1A from Caulobacter crescentus NA1000 Δfur

 Score =  224 bits (571), Expect = 1e-62
 Identities = 176/528 (33%), Positives = 257/528 (48%), Gaps = 39/528 (7%)

Query: 187 QFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLS 246
           + P  +  A +  EDR FY H GV P AI RA+  N +AG   +GGST+TQQLAKN FLS
Sbjct: 239 KLPPYVPGAFIAIEDRRFYSHMGVDPKAIARAVGRNAQAGGVSEGGSTITQQLAKNAFLS 298

Query: 247 SDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPL 306
           SDR L RK +EA +A+ ++ R SKD IL  YL+ VY G    D   G   A+R YFG+P 
Sbjct: 299 SDRNLRRKAQEALIAVYLEARLSKDEILSRYLSSVYFG----DGAFGLRAAARHYFGKPP 354

Query: 307 QELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPL 366
           ++L I + A+L G+VK PS   P    E ARER  +VL  M+E   +T  E   AV   L
Sbjct: 355 EQLSIGEAAMLAGLVKAPSRLAPTNNIEGARERMRVVLGAMVETKTITQAE-ADAVGEIL 413

Query: 367 DVQKTAQIASRQPAYFQQVSI-ELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQI 425
            V+   ++ +   +YF   ++ + +  +G ++       V T+LDP  Q K E+ ++D I
Sbjct: 414 PVEAEEKLPT--GSYFADWALPQARALIGARY---GETIVKTTLDPELQEKAERILNDYI 468

Query: 426 PQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLT 485
            +  +    ++   A+   R  G + AMVGG+      FNR  +A RQ GS  K  VYL 
Sbjct: 469 ERDGQVL--NVTQGALVAMRRDGRVVAMVGGRDYKQSQFNRA-DAERQPGSAFKLFVYLA 525

Query: 486 ALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRG-EVPLYLALAQSLNVPTVAL 544
           AL   +   + T + D P+ + G     + P+N++ +Y   EVPL  A A S NV  V L
Sbjct: 526 ALR--EGMTVTTPILDTPVQVSG-----YMPKNHEGKYHAREVPLITAFAGSSNVAAVRL 578

Query: 545 GMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSAL 604
              LG  +V      LGV  +    +PS L  +    P  + ++          A  S  
Sbjct: 579 AHDLGPAKVIKVARDLGVTEE----IPSDLTMALGTGPMSLTRL--------TAAYASVA 626

Query: 605 RSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGKTG 664
                +  + + E     ++A D +        ++     GTG     + +     GKTG
Sbjct: 627 AGEYPIVPHGVTEFKKPKTKAYDPKVLANMRDLLRSATHRGTG----VEAAIPGAFGKTG 682

Query: 665 TTNDNRDSWFVGVDGREVTTIWLGRDDNQPTK-LTGASGALRVYAQYL 711
           TT D  D+ FVG     V  +WLG DDN     + G     R++  ++
Sbjct: 683 TTQDYHDAIFVGYVEDLVVGVWLGNDDNSSMNGVVGGGEPARIWKAFM 730