Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 697 a.a., PBP1A family penicillin-binding protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  312 bits (799), Expect = 4e-89
 Identities = 189/534 (35%), Positives = 300/534 (56%), Gaps = 25/534 (4%)

Query: 186 DQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFL 245
           D  P+ +  A +  EDR FY H G  P+ + RAM  N++AGR VQGGSTLTQQLAKN+FL
Sbjct: 89  DALPDYVPAAFIAIEDRRFYHHPGFDPIGMMRAMATNVRAGRVVQGGSTLTQQLAKNLFL 148

Query: 246 SSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQP 305
           + D+ + RK++E  +A+ ++ ++SK  IL  YLN VY G +GA   +G   AS+ YF + 
Sbjct: 149 TPDQNMRRKVQELMLAVWLEMKFSKKEILALYLNRVYFG-AGA---YGIEAASQRYFDKS 204

Query: 306 LQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRP 365
            + L + + ALL G++K PS Y+P+  +ERA  R  +VL  M E  ++TA + +QAVT+P
Sbjct: 205 AKNLTVGEAALLAGLLKAPSRYSPVSESERAAARATVVLNEMEEAGVITAAQREQAVTQP 264

Query: 366 LDVQKTAQIASRQPAYF-QQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQ 424
           + V +T  +A++   YF   +   ++  +G+       + V T+LD   Q+  E+++   
Sbjct: 265 VIVSRT--LATQHAQYFIDWLDKSIRSLVGE---PTEDMVVETTLDLTLQTAAERSVR-- 317

Query: 425 IPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYL 484
              L + AGK ++ AA+      G +RAM+GG       FNR ++A RQ GS  KP VYL
Sbjct: 318 -RILDRDAGKGVQQAALVALDGDGRVRAMIGGSSYADSQFNRAVDAKRQAGSAFKPFVYL 376

Query: 485 TALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVAL 544
            A+     Y   T + D+P+T+       W+PRNY   + G + L  A+AQS N     +
Sbjct: 377 AAV--EAGYTPQTPVVDQPITI-----GNWSPRNYSGTFSGNMTLAQAVAQSTNTVAAYV 429

Query: 545 GMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSAL 604
             ++G D V+    +LG+    I   P+M LG+  ++P ++A  Y    N G++     +
Sbjct: 430 ADQVGRDSVARAARRLGI-ESRIGLEPAMALGAVEVSPIEMATAYDAFANGGRRVDAYGI 488

Query: 605 RSVLDLEGNVLYESLPRVS-QAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGKT 663
             +   +G V+Y+     S QA++  + +     ++  V  G+GR  +A  S   LAGKT
Sbjct: 489 SRIRTPQGRVIYQRQSGQSGQAINNPSLYYMNQMLRGVVTSGSGR--SAAISGRDLAGKT 546

Query: 664 GTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTK-LTGASGALRVYAQYLKYRIP 716
           GTT+D +D+WFVG  G  VT +W+G+DDN   + +TG S    ++  +++  +P
Sbjct: 547 GTTSDYKDAWFVGYTGGFVTAVWVGKDDNTAMRGVTGGSSPAAIWKGFMEAALP 600