Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 783 a.a., Murein polymerase from Alteromonas macleodii MIT1002

 Score =  646 bits (1666), Expect = 0.0
 Identities = 331/771 (42%), Positives = 491/771 (63%), Gaps = 6/771 (0%)

Query: 1   MTRKSSNRSRGRKARSGKSASSSKLQIWLGRIWSIGWKLALTLAAVLVFIGIYLDSMIKQ 60
           M ++ +  +   K+++  +   S  + W  +++   W++ L    VL     YLD+ IK 
Sbjct: 1   MAKRQTKDNPSSKSKASSNGKGSAKRSWFFKLF---WRVTLIGLVVLGAYAFYLDAQIKH 57

Query: 61  RFEGQLFDLPTVVYARILTLEPGNGLSLQELRNELDVLNYRKVAQPRFPGEYASSSSRIE 120
            F G  +++P  ++AR L +  G  ++ QE+ +EL++L YRKV      GEY+  +  + 
Sbjct: 58  AFSGNKWEVPAQIFARPLEISKGEEITPQEVIDELNLLGYRKVTFADSSGEYSYQNKVLT 117

Query: 121 LIRRPFEFADGPEPDRRVMLTFDGSGLNKIESLEQKRELGYLRLEPKLMGMLEKDSPEQR 180
           + RR F+F +G EP R +++T++G+ + +I    Q R  G  +LEP L+  +   S E R
Sbjct: 118 VQRRAFQFPEGAEPLRHIVITWEGARIGEIYDKSQGRPYGSAKLEPWLVTRMTSGSQEDR 177

Query: 181 LFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLA 240
           + +  D  P++L  AL + EDR+FY H GV+PL+I RA++ N+ AGRTVQGGSTLTQQL 
Sbjct: 178 MLVTLDTIPDMLPKALTLVEDRNFYNHHGVAPLSILRALMANIAAGRTVQGGSTLTQQLV 237

Query: 241 KNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRL 300
           KN+FL+ +R++ RK +EA MA+IID RYSK  I+EAYLNEV+LGQ+G  A+HGFGLAS  
Sbjct: 238 KNMFLTRERSIVRKAKEAIMAVIIDARYSKSEIIEAYLNEVFLGQNGDMAVHGFGLASYF 297

Query: 301 YFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQ 360
           YF +P  EL   ++A LV ++KGPSYYNP +YAER +ERRDLVL+++ + + ++  +Y++
Sbjct: 298 YFDRPANELSTPEIATLVAIIKGPSYYNPRKYAERTKERRDLVLRMLFDENEISRQDYER 357

Query: 361 AVTRPLDVQKTAQIAS-RQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQ 419
            V  PL +   A +AS + PA+ +QV  EL E L +    DSG++VFT+LD V+Q + E 
Sbjct: 358 FVNMPLGLASGASLASGKHPAFMEQVRRELNEILAEPSLRDSGVKVFTTLDIVAQRRAES 417

Query: 420 AIHDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVK 479
           A+   +  L K     L+ A +  D  SGE+RA+VGGK   + GFNR L+A R IGSL+K
Sbjct: 418 ALSGTLDGLQKDRKVPLQGAMVVTDSASGEVRAIVGGKDFAFKGFNRALDAKRPIGSLIK 477

Query: 480 PAVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNV 539
           PAVYLTAL  P Q+NLAT L+D+P+TL+   G  W+P+NYD+++RG+VPL   L +SLN+
Sbjct: 478 PAVYLTALEDPTQFNLATPLKDEPITLESRNGKTWSPQNYDKEFRGQVPLLQGLVESLNI 537

Query: 540 PTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKA 599
           PTV LGM++G+D ++ T+ +LGV    +  VPS+ LG+F LTP+   QMYQTL+N G+  
Sbjct: 538 PTVNLGMQIGLDALADTIERLGVT-TPVDKVPSLTLGAFELTPFSTNQMYQTLSNDGRYI 596

Query: 600 PLSALRSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAAL 659
           PL  + SV+  +  +L++     +Q  D+ A +L  YA+ +   EGT + +   F +  +
Sbjct: 597 PLHTVTSVVTADNALLWKKAEFFAQRTDEAATYLLNYALYKVTTEGTAKRIGWNFGNVNM 656

Query: 660 AGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASGALRVYAQYLKYRIPEKL 719
           AGKTGTT+D RDSWF G D   V T+W+G DDNQP  LTGA GAL V+  Y+K + P+ L
Sbjct: 657 AGKTGTTDDYRDSWFSGFDRNNVVTVWVGNDDNQPVYLTGAGGALPVFINYMKSQSPKSL 716

Query: 720 QLPWPEGITTFGFAKQTQGGLKLDCDNAFKLP-IWDNQQQLKQQCENRPTE 769
              +P+G+    F  +T   +   C  +  +P I D     +Q C  RP +
Sbjct: 717 SRRFPKGLGIAHFDAKTGAVVVAGCAGSLSVPAILDVLPPPQQDCSGRPVD 767