Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 757 a.a., penicillin binding protein from Agrobacterium fabrum C58

 Score =  257 bits (656), Expect = 2e-72
 Identities = 178/538 (33%), Positives = 273/538 (50%), Gaps = 31/538 (5%)

Query: 186 DQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFL 245
           DQ P+  + A+L TEDR F+ H G+  + + RAM  N +AG  VQGGSTLTQQLAKN+FL
Sbjct: 149 DQMPDHFIKAVLATEDRRFFDHFGIDFIGLARAMSENARAGGVVQGGSTLTQQLAKNLFL 208

Query: 246 SSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQP 305
           +++R+L RK++EA++AL ++   SK  IL  YL+  Y+G        G   A++ YFG+ 
Sbjct: 209 TNERSLERKIKEAFLALWLESNMSKKEILSLYLDRAYMG----GGTFGAAAAAQFYFGKN 264

Query: 306 LQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRP 365
           L ++ + + A+L G+ K P+ Y P      AR R + VL  +++  ++T  +   A   P
Sbjct: 265 LTDVTLSESAILAGLFKAPAKYAPHVNLPAARARANTVLSNLVQSGLMTEGQVIGARRNP 324

Query: 366 LDVQKTAQIASRQPAYFQQVSIELKEKLG--DKFKADSGLRVFTSLDPVSQSKLEQAIHD 423
             V   A +  + P YF   + +  ++L    KFK D  + V T++D   Q   EQA+  
Sbjct: 325 ATVIDRADV--KAPDYFLDWAFDEVQRLAAEGKFK-DHTVVVRTTIDTGLQQAAEQAMEM 381

Query: 424 QIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVY 483
           ++ +  +  G  ++  A+ +  + G +RAMVGG+  G   FNR   A RQ GS  K   Y
Sbjct: 382 ELREYGE--GYRVKQGAMVMIENGGGVRAMVGGRDYGESQFNRATAALRQPGSSFKVYTY 439

Query: 484 LTAL---AHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVP 540
             A+     PD     T + D P+T +G     W+P+NY R Y G+V L +ALA+S N  
Sbjct: 440 SAAMEKGMKPD-----TLISDAPVTWRG-----WSPQNYGRSYAGKVTLQVALAKSYNTV 489

Query: 541 TVALGMK-LGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKA 599
            V L    LG   +  T   +GV    +R   ++ LG+  +T    A  Y      G ++
Sbjct: 490 PVRLAKDVLGTQVIVDTAKAMGV-ATPLRSDKTIPLGTSEVTVLDQATAYAVFPADGMQS 548

Query: 600 PLSALRSVLDLEGNVLYE---SLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSS 656
               +  V+D EGNVLY+     P   + + ++A       +      GT R   A  + 
Sbjct: 549 RRHGIEQVMDYEGNVLYDFSHDEPPAKRVLSEEANSKMNQMLVTIPVMGTAR-RGALDNG 607

Query: 657 AALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQP-TKLTGASGALRVYAQYLKY 713
               GKTGT+   RD+W+VG  G   T +W G D+  P   +TG +     Y + + Y
Sbjct: 608 IVSGGKTGTSQAYRDAWYVGFTGNYTTAVWFGNDEFTPMNNMTGGALPAMTYKRLMDY 665