Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 764 a.a., penicillin-binding protein from Agrobacterium fabrum C58

 Score =  281 bits (718), Expect = 1e-79
 Identities = 185/522 (35%), Positives = 281/522 (53%), Gaps = 28/522 (5%)

Query: 195 ALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLSSDRTLWRK 254
           A++  EDR FY H GV PL +GRA+V N+  GR VQGGSTLTQQLAKN+FLS DRTL RK
Sbjct: 148 AVMAIEDRRFYSHFGVDPLGLGRAIVTNVLTGRAVQGGSTLTQQLAKNLFLSPDRTLERK 207

Query: 255 LREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPLQELRIDQL 314
           ++E  ++  +++ ++KD+IL  YLN VY G +     +G   ASR YF +  +++ + + 
Sbjct: 208 VQEVLLSFWLEHEFTKDQILAMYLNRVYFGSNA----YGVEAASRRYFNKSARDVNLGEA 263

Query: 315 ALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPLDVQKTAQI 374
           A+L G++K PS  +P R  + A ER  +VL+ M +   +T  E + A+++P    K  + 
Sbjct: 264 AMLAGLLKAPSRLSPARDPQAAEERAQVVLQSMRDVGFITDDEIKTAMSQP--PTKAKRF 321

Query: 375 ASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQIPQLAKTAGK 434
            S    Y   + +E    L  + K D  + V T++DP  +   E+A+   +    K  G 
Sbjct: 322 WSGAEHYAADMVLEEVRGLVGEVKQD--IVVDTTIDPNLERDAEKALTHVLQGDGKKQGA 379

Query: 435 DLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYN 494
             +AA +++D  +G IRA+VGG       FNR + A RQ GS  KP VY+ AL       
Sbjct: 380 S-QAALVSID-GTGAIRAVVGGADYAQSQFNRAVKAKRQPGSAFKPFVYVAAL--ESGLT 435

Query: 495 LATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQVS 554
             T   D P+ +       WTP NY+++YRGEV L  ALA SLN     L M++G ++V+
Sbjct: 436 PYTIRNDGPVRI-----GNWTPENYEKKYRGEVTLATALANSLNTIAAQLVMEVGPERVT 490

Query: 555 ATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGNV 614
               ++G+   E++   S+ LG+  ++  ++   Y    N G KA    ++ + D +G V
Sbjct: 491 QVAHRMGI-ESELQNNASIALGTSEVSLMELTASYAPFMNGGYKATPHIVKRITDADGKV 549

Query: 615 LYESL----PRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGKTGTTNDNR 670
           LYE+     PRV   + ++ A      + + + EGTG+    Q   A  AGK+GTT   R
Sbjct: 550 LYENKYDNPPRV---LSEEIAATMNGMLSRVITEGTGKAARLQGWQA--AGKSGTTQSFR 604

Query: 671 DSWFVGVDGREVTTIWLGRDD-NQPTKLTGASGALRVYAQYL 711
           D+ FVG      T +W G DD     K+TG     R +  ++
Sbjct: 605 DALFVGYTSNLTTGVWFGNDDGTSMKKVTGGGLPARAWKDFM 646