Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 848 a.a., Penicillin-binding protein 1A from Acinetobacter radioresistens SK82

 Score =  167 bits (423), Expect = 2e-45
 Identities = 90/248 (36%), Positives = 147/248 (59%), Gaps = 6/248 (2%)

Query: 187 QFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLAKNIFLS 246
           Q P   + A L  ED  F++H G+S   +GRA+  ++       GGST+T Q+AKN +LS
Sbjct: 79  QIPPAFIHAFLAAEDSSFFEHSGISFKGLGRAVTESVTGSDVQTGGSTITMQVAKNYYLS 138

Query: 247 SDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRLYFGQPL 306
            +RTL RKL E ++A  I+   SK+ IL  Y+N+++LG++     +G   A+++Y+ + L
Sbjct: 139 PERTLKRKLTEIFLARKIEQNLSKEEILTLYVNKIFLGKNA----YGIAAAAKIYYNKSL 194

Query: 307 QELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQAVTRPL 366
            EL + Q+A+L G+ K PS YNP+   ERA ERR+ +L  M++   ++  +YQ AV  P+
Sbjct: 195 DELSLAQMAMLAGLPKAPSKYNPVANPERALERRNWILGRMLQLGYISQSQYQAAVAEPI 254

Query: 367 DVQKTAQ-IASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQAIHDQI 425
           ++    + I++R P   + V  EL E+ GD    DSG +V+T++D   Q+  EQA+ + +
Sbjct: 255 NLDMPDRGISNRFPYVGEMVRSELVERFGD-LAIDSGYKVYTTIDSKRQAYAEQAVQNGL 313

Query: 426 PQLAKTAG 433
               +  G
Sbjct: 314 EDYDRRHG 321



 Score =  125 bits (313), Expect = 1e-32
 Identities = 100/341 (29%), Positives = 150/341 (43%), Gaps = 71/341 (20%)

Query: 427 QLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKPAVYLTA 486
           QL K  G+      IA++ ++G I A+VGG       FNR L   RQ GS +KP +Y  A
Sbjct: 415 QLPKVQGQ-----LIAINPNNGAIEAVVGGYSFYQSKFNRALQGWRQPGSTIKPFIY--A 467

Query: 487 LAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVPTVALGM 546
           LA        T + D P+T+       WTPRN D +Y G +PL  AL  S N  +V L  
Sbjct: 468 LALERGMTPYTMVNDSPITI-----GKWTPRNSDGRYLGMIPLRRALYLSRNTVSVRLLQ 522

Query: 547 KLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAPLSALRS 606
            +GI++    L   G+  D+I    ++ LG+  + P Q+A  Y T  N G +     +  
Sbjct: 523 NVGIERARQLLMDFGLRDDQIPRNYTIALGTPQVLPVQMATGYATFANGGYRIQPHFISR 582

Query: 607 VLDLEGNVLYESLPR----------------------------VSQAVDQ---------- 628
           + D  G V++E+ P                              +Q++DQ          
Sbjct: 583 IEDAYGKVIFEADPEYACIPCINAKDDTEEDTPQTPDDEVIEVTNQSLDQSKNNISEQKE 642

Query: 629 --------------QAAWLTTYAMKQGVQEGTGRYLNAQFSSAALAGKTGTTNDNRDSWF 674
                          +A+     ++  +Q GTGR +  +     + GKTGTTND +D+WF
Sbjct: 643 PESDYRQAQRILKSSSAYDMANILRDVIQHGTGR-VALKIGRGDIGGKTGTTNDAKDAWF 701

Query: 675 VGVDGREVTTIWLGRDDNQPTKL----TGASGALRVYAQYL 711
            G +G+ VT  W+G D  QPT L     G   AL ++  ++
Sbjct: 702 AGFNGKLVTVAWVGFD--QPTTLGRREYGGVAALPIWINFM 740