Pairwise Alignments

Query, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

Subject, 800 a.a., Penicillin-binding protein 1B from Acinetobacter radioresistens SK82

 Score =  484 bits (1247), Expect = e-141
 Identities = 276/713 (38%), Positives = 420/713 (58%), Gaps = 13/713 (1%)

Query: 48  VFIGIYL---DSMIKQRFEGQLFDLPTVVYARILTLEPGNGLSLQELRNELDVLNYRKVA 104
           V  GIYL   D++I+ +FEGQ +D+P  V+AR L +     ++ Q+   EL +L Y+  +
Sbjct: 23  VAFGIYLIRLDNIIRDKFEGQRWDIPAKVFARPLEIYTNAPVNQQDFAQELKLLGYKSAS 82

Query: 105 QPRFPGEYASSSSRIELIRRPFEFADGPEPDRRVMLTFDGSGLNKIESLEQKRELGYLRL 164
                G Y S  + + +  R F+F D  EP++ + LTF+   ++++ + +     G  RL
Sbjct: 83  SYNKSGSYVSQGNTLYVHTRGFDFGDSVEPEQILELTFNDQKISEVRTTKPATS-GITRL 141

Query: 165 EPKLMGMLEKDSPEQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLK 224
           EP L+G +     E R+ ++ ++ P+ L++AL+ TEDR+FY H GVS   I RA+V NL 
Sbjct: 142 EPLLIGGIYPQHNEDRVLIKLNRVPKPLIEALIATEDRNFYHHHGVSVRGIARALVSNLT 201

Query: 225 AGRTVQGGSTLTQQLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLG 284
            GR  QGGSTLTQQL KN +LS ++T  RK+ EA MA++I+  Y KD ILEAYLNEV LG
Sbjct: 202 GGRR-QGGSTLTQQLVKNFYLSPEKTYKRKINEALMAMLIELHYDKDEILEAYLNEVNLG 260

Query: 285 QSGADAIHGFGLASRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVL 344
           Q+G  +I+G+GLAS+ YFG PL+EL I Q A LVG+V+GPS YNP R  E A++RR++VL
Sbjct: 261 QNGNYSINGYGLASQFYFGLPLRELNISQQAFLVGLVQGPSLYNPWRNPEAAKKRRNVVL 320

Query: 345 KLMMEHDILTAPEYQQAVTRPLDV-QKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGL 403
           K M     LT  EY+    RPL+V  K     ++ P +   V  +L+ +  D    + GL
Sbjct: 321 KNMQVMGYLTEAEYEDESARPLNVISKPTLGPAKFPDFLDIVRRQLRTEYQDGDLTNRGL 380

Query: 404 RVFTSLDPVSQSKLEQAIHDQIPQLAKTAG---KDLEAAAIAVDRHSGEIRAMVGGKRTG 460
           R+FT+LDP++Q++++ A  + + +L+K      K+L+ A +     +GE+ A VG  +  
Sbjct: 381 RIFTTLDPIAQTRVQTAFKNSVERLSKRNPGRLKNLQGAVLIAHPENGELIAAVGSTQ-D 439

Query: 461 YDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYD 520
           + GFNR L+A RQ+GSL+KP +YL+A+    +Y  A++++D  +++   +   WTP+NY 
Sbjct: 440 FTGFNRALDAKRQVGSLLKPVIYLSAI-ESGRYTWASSIQDAAISIPIDKSKEWTPKNYA 498

Query: 521 RQYRGEVPLYLALAQSLNVPTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSL 580
               G V +  ALA S N+  V LG + G+   +  L K GV    I   PS+ LG+  +
Sbjct: 499 GGEYGVVSMMQALANSYNLSAVRLGQEFGLSTFTNQLRKFGVT-SNIPAFPSIFLGAVEM 557

Query: 581 TPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQ 640
           +P +V  +Y+     G K P  A+R+V+D +G +L      V Q +D  +A++  Y ++Q
Sbjct: 558 SPMEVMSIYENFATGGFKYPPRAIRTVVDADGRLLDRYGLDVQQTIDPSSAYILNYGLQQ 617

Query: 641 GVQEGTGRYLNAQF-SSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTG 699
            +  GTGR     F +S  LAGK+GTTND RDSWF G  G  +  +WLG D+N+ T LTG
Sbjct: 618 VMNIGTGRSAYNSFPASLKLAGKSGTTNDTRDSWFAGYSGNHLAVVWLGLDNNKVTGLTG 677

Query: 700 ASGALRVYAQYLKYRIPEKLQLPWPEGITTFGFAKQTQGGLKLDCDNAFKLPI 752
           ++GAL V+   +K    E + L   + +      + T       C+ A  +PI
Sbjct: 678 STGALPVWINVMKQLKQEPVNLRQTDNVQWHWIDRATGYLSAQGCEGAMYIPI 730