Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 1343 a.a., ATP-dependent RNA helicase HrpA from Rhodanobacter sp000427505 FW510-R12

 Score =  235 bits (599), Expect = 1e-65
 Identities = 161/471 (34%), Positives = 246/471 (52%), Gaps = 24/471 (5%)

Query: 4   LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAG-GFHGKIIMLEPRRLAAR 62
           LPI      ++  I     +++    G+GK+T  P   L AG G  G I   +PRRLAAR
Sbjct: 81  LPISARGKDIVKLIREHQVVVIAGETGSGKTTQLPKLCLAAGRGEAGMIGCTQPRRLAAR 140

Query: 63  NIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIF 122
           ++AR +A++LG  +G+ VG++VR  ++VS  + ++ +T+GI+    Q DP L   D LI 
Sbjct: 141 SVARRVAEELGTPLGEVVGFQVRFNDQVSERSLIKFMTDGILLAETQGDPWLSAYDTLII 200

Query: 123 DEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGFP 182
           DE HERS++ D  L   L+  +  R +LKI+V SAT+D          A  VE +GR +P
Sbjct: 201 DEAHERSLNIDFLLGY-LKRLAIKRPELKIIVTSATIDTARFAEHFDGAPVVEVEGRAYP 259

Query: 183 IEIRYQPL---------RSDEPLVTAMQRQIRHLLQHET-----GSLLAFLPGAASINQL 228
           +E R++P+         +SD          I  +L   T     G +L FLPG   I   
Sbjct: 260 VETRWRPVGGQSHFSQAKSDSDHRQGSAEHIAAVLDEITRGDPRGDVLVFLPGEREIRDA 319

Query: 229 TEQLSDLA-SEVEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVL 287
              LS     E EI PLY ++    Q R   P    +R+VVLATN+AETSLT+  IR V+
Sbjct: 320 HLLLSRRQYRETEIMPLYARLSAGEQDRVFKPGV--KRRVVLATNVAETSLTVPRIRYVI 377

Query: 288 DSGLERSARFDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVP 347
           D+G  R  R+  ++ + RL    I+Q++A+QR GR GR+ PGIC RLY EA    +    
Sbjct: 378 DTGTARVKRYSQRSQLERLHVEPISQAAADQRKGRCGRVGPGICYRLYDEADFAGRAAFT 437

Query: 348 EPEMLHTDLAPLALE-LAQWGAQPSDLAWLNLPPSSAFAQAQQLLQRLGLLDARTQITAA 406
           +PE+L + LA + L  LA    +  +  +L  P     A   + L  +  +D   ++TA 
Sbjct: 438 DPELLRSSLANVILRMLALKLGEVDEFPFLEAPDPRVVADGFRRLTEISAIDEGRKLTAI 497

Query: 407 GKEAHLLGVEPRIAAMLLSADRLGESALQSALALTVLL--EEPERQVIDVQ 455
           G+    L ++ ++A ML+  ++L   AL+  L +   L  ++P  +  D +
Sbjct: 498 GRTLAKLPIDVQLARMLVEGEQL--HALRELLVIVAFLSIQDPRERPADAR 546