Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 1261 a.a., ATP-dependent helicase HrpA from Variovorax sp. SCN45

 Score =  229 bits (584), Expect = 7e-64
 Identities = 159/456 (34%), Positives = 243/456 (53%), Gaps = 32/456 (7%)

Query: 14  LSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFH-------GKII-MLEPRRLAARNIA 65
           ++ I+    +I+    G+GK+T  P   L  G          G++I   +PRR+AA ++A
Sbjct: 1   MAAISAHQVVIVCGETGSGKTTQLPKIALALGRGKLNAEPGKGRLIGHTQPRRIAASSVA 60

Query: 66  RYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIFDEF 125
           + +A++L   +G  VG++VR ++R+SR   ++++T+GI+    Q DP L   D LI DE 
Sbjct: 61  KRIAEELKTPLGDVVGFKVRFQDRLSRDASVKLMTDGILLAETQTDPLLKAYDTLIIDEA 120

Query: 126 HERSIHADTALALALEVQSALREDLKIVVMSATLDQ----QALQNLLPQASYVESQGRGF 181
           HERS++ D  L    E+    R DLK++V SAT+D     Q   +    A  +   GR F
Sbjct: 121 HERSLNIDFLLGYLREILPR-RPDLKVIVTSATIDADRFAQHFASAKGPAPTIMVSGRTF 179

Query: 182 PIEIRYQPLRS--DEPLVTAMQRQIRHLLQ--HETGSLLAFLPGAASINQLTEQL----- 232
           P+E RY+P     +  L  A+   +  L +  H  G +L FLPG   I +  + L     
Sbjct: 180 PVEQRYRPFEESREHDLNDAIADAVDELWRDPHNAGDILIFLPGEREIREAADHLRRHVS 239

Query: 233 -SDLASEVEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGL 291
              L    E+ PL+ ++    Q R I  +  GRR +VLATN+AETSLT+ GIR V+D+G 
Sbjct: 240 HQPLFRSAEVLPLFARLSGPEQDR-IFESHNGRR-IVLATNVAETSLTVPGIRYVIDTGT 297

Query: 292 ERSARFDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEM 351
            R  R+  ++ + +L    I+Q++A QRAGR GR+  GIC+RLY E   + +P   +PE+
Sbjct: 298 ARVKRYSFRSKVEQLLVEPISQAAANQRAGRCGRVANGICIRLYDEKDFEGRPRFTDPEI 357

Query: 352 LHTDLAPLALELAQWGAQPSDLA---WLNLPPSSAFAQAQQLLQRLGLLDARTQITAAGK 408
           L + LA + L +     +  D+A   +L  P   A A   QLL  LG +D   ++T  G 
Sbjct: 358 LRSSLAGVILRMK--SLRLGDVARFPFLEAPSPRAIADGYQLLNELGAVDDANELTHTGA 415

Query: 409 EAHLLGVEPRIAAMLLSADRLG--ESALQSALALTV 442
           E   L ++PR+  M+L A   G  E  L  A AL+V
Sbjct: 416 ELSRLPLDPRVGRMILEARARGALEEVLIIASALSV 451