Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 848 a.a., ATP-dependent helicase HrpB from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  540 bits (1390), Expect = e-157
 Identities = 343/848 (40%), Positives = 487/848 (57%), Gaps = 48/848 (5%)

Query: 4   LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGF-HGKIIMLEPRRLAAR 62
           LP+ E +P+LL  +  S + +L+A PGAGK+T  PL LL+A     GKI++LEPRRLA R
Sbjct: 13  LPVKEALPRLLQVLNTSNRAVLEAPPGAGKTTLVPLALLEADWRGDGKILVLEPRRLATR 72

Query: 63  NIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIF 122
             A  +A  LGE VGQ VGY VR +++VSR T++E+VTEGI+TR++Q+DP L+GV  +IF
Sbjct: 73  AAAERMADLLGEPVGQTVGYWVRMDHKVSRKTRVEVVTEGILTRIIQDDPALEGVAAIIF 132

Query: 123 DEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGFP 182
           DEFHER++ AD  LALAL+ Q+ LR DL+++VMSATLD  A+   L QA  V+S+GR FP
Sbjct: 133 DEFHERNLQADLGLALALDAQAVLRPDLRLLVMSATLDATAIGQWL-QAPVVQSEGRLFP 191

Query: 183 IEIRY-QPLR-------SDEPLVTAMQRQIRHLLQHET-GSLLAFLPGAASINQLTEQLS 233
           ++  +  P           + L T   + IR  L  E  G LL FLPG   I ++ +QL 
Sbjct: 192 VQTHFLSPAEVAAAGNYPSQRLATLTPKAIRQALSQEAEGDLLVFLPGMGEIKKVAQQLE 251

Query: 234 D-LASEVEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLE 292
           + L   +E+  L+G +  + Q  AI P+  G+RKVVLAT+IAETSLTIEG+ IV+D G  
Sbjct: 252 NTLGPAIELHLLHGDLPLSKQVAAIQPSPKGKRKVVLATSIAETSLTIEGVTIVVDGGFA 311

Query: 293 RSARFDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEML 352
           R  RF  +TG+T L  V ++Q+ A+QR GRAGRL PG+C RL+S A   Q P    PE+L
Sbjct: 312 RVPRFTPRTGLTTLATVPVSQAGADQRRGRAGRLGPGVCYRLWSTADQMQLPPRQSPEIL 371

Query: 353 HTDLAPLALELAQWGAQ-PSDLAWLNLPPSSAFAQAQQLLQRLGLLDARTQITAAGKEAH 411
             DL  L LELA WG +  + L WL+ PP++A A A+ LLQRL  LDA    T  GK   
Sbjct: 372 DADLTGLVLELALWGVKDATTLNWLDSPPAAALALAKDLLQRLEALDAAGNPTPHGKALA 431

Query: 412 LLGVEPRIAAMLLSADRLGESALQSALALTVLLEEPE----------RQVIDVQHSLHRW 461
            LG+ PR+  +++    LG  A  +A AL  LL E +            + D+Q  L   
Sbjct: 432 SLGIHPRLGHLVMRGHELGFGA--TACALAALLSERDVLKPLQLGWGEGIPDLQLRL-EL 488

Query: 462 QQGRHP----------KQKLLIQRAQSLAHKLDTAFSLSSVDSAWLPLVACLAFPDRIAQ 511
             G+ P            + + ++AQ+L  +L  A    ++      L+  LA+PDR+AQ
Sbjct: 489 IAGKSPVTPGFVVDENALRRVKEQAQNLRQRLRDA--TGNLHPELAGLLTALAYPDRLAQ 546

Query: 512 QRGQQTGQFLLANGHGAWLAVEDRLSAADYLVA-LDLMRGQTQASQIFSALELDIHALER 570
           +  +  G+  L +G  A LA E    A  Y +A LDL     +  +I  A  L    L  
Sbjct: 547 R--EAPGRVRLVSGQRASLATELFGEAEFYSIAHLDL----GKQPRILLAAPLAKSDLLE 600

Query: 571 VLPALISRVEQVDWDEKAGRLSAEAQWRIDQLVLRREKLPEPDKQKMTQALLSYVRRKGL 630
                +  +++V W E + ++ A    R+  L++    + +PD  K+  ALL  ++ KG+
Sbjct: 601 HFSEQVEVLQEVRWHEGSQQVVARHLTRLGALLVEESTVSKPDADKVAAALLQALQEKGV 660

Query: 631 TVLQWSEDASEWLARARCA-AEWLPEEAWPALDDETLLARLELWLEPYLAGVTSVKGLQS 689
             L WSE+A     R R A    L  E WP   D  L A ++ WL P+L G+ ++  +  
Sbjct: 661 ERLPWSEEALR--TRQRLAFLHRLEPENWPDTSDAALAASMDSWLAPHLHGLRTLDQVAR 718

Query: 690 VSVLQALKHYLGWELSQQLDEWLPTHHLLPTGNHKKIRYQLGMEPTLSVRMQEVFGEQSS 749
           +   + L   L WE  Q+++   P+H  +P+G+   + Y     P L+VR+QEVFG   +
Sbjct: 719 LDFKEILLAELAWEQRQEMERLAPSHLQVPSGSRIALDYSDAASPVLAVRLQEVFGLLDT 778

Query: 750 PRVAKGTRAVVMELLSPAQRPLQVTRDLASFWAGAYKEVQKEMKGRYPKHVWPDDPANHV 809
           PRV  G   +++ LLSPA RP+QVTRDL SFW+  Y EV+K+++GRYPKH WPDDP    
Sbjct: 779 PRVGGGKVPLLLHLLSPASRPVQVTRDLRSFWSNGYFEVRKDLRGRYPKHHWPDDPLTAP 838

Query: 810 ATSKTKRQ 817
            T  TK++
Sbjct: 839 PTRGTKKR 846