Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 831 a.a., ATP-dependent helicase HrpB from Magnetospirillum magneticum AMB-1

 Score =  574 bits (1480), Expect = e-168
 Identities = 350/832 (42%), Positives = 481/832 (57%), Gaps = 21/832 (2%)

Query: 1   MSPLPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHG-KIIMLEPRRL 59
           M  LPI  V+P++ +G+  S  L+L+A PGAGK+T  PL LL      G +I+MLEPRRL
Sbjct: 1   MHDLPIESVIPEIRAGLRQSHGLVLQAPPGAGKTTRVPLALLDEPWLAGQRILMLEPRRL 60

Query: 60  AARNIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDV 119
           AAR  A  +A  LGE+ G+ VG+R+R ++RV   T++E+VTEGI+ RM+Q+DP LDGV +
Sbjct: 61  AARAAATRMASTLGEQPGETVGWRIRFDSRVGPKTRIEVVTEGILNRMIQDDPSLDGVGL 120

Query: 120 LIFDEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGR 179
           +IFDEFHERS+ AD  LAL LE +  LR+DLK+VVMSATLD + +  L+  A  V SQGR
Sbjct: 121 VIFDEFHERSLFADLGLALVLESRQGLRDDLKLVVMSATLDGEPVARLMGGAPVVTSQGR 180

Query: 180 GFPIEIRYQPLRSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQLSD--LAS 237
             P+E R+         V  +   +   L  E G +L FLPG+  I ++   L+D   A 
Sbjct: 181 AHPVETRFLARPEPRAFVDGVAAAVIRALDEEEGDILVFLPGSGEIRRVESLLADHPAAR 240

Query: 238 EVEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARF 297
            V I PLYG +   AQ  AI P   G RKVVLAT IAETSLTIEG+R+V+D G  R ARF
Sbjct: 241 GVLIAPLYGDLSQDAQDGAIRPRRDGGRKVVLATAIAETSLTIEGVRVVVDGGRMRLARF 300

Query: 298 DLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDLA 357
           D  +G+TRL  + ++++ A+QR GRAGRL PG+C RL+SEA  +       PE+   DLA
Sbjct: 301 DPGSGMTRLVTLPVSRAGADQRRGRAGRLGPGVCYRLWSEADDRALLPFTAPEVTEADLA 360

Query: 358 PLALELAQWG-AQPSDLAWLNLPPSSAFAQAQQLLQRLGLLDARTQITAAGKEAHLLGVE 416
           PLAL+LAQWG  +  DL+WL+ PP++  AQA++LL  LG LD   +ITA GK    LG+ 
Sbjct: 361 PLALDLAQWGVTEALDLSWLDPPPAAHLAQARELLTELGALDDGLRITAHGKAMARLGLH 420

Query: 417 PRIAAMLLSADRLGESALQSALALTVLLEE-----PERQVIDVQHSLH----RWQQGRHP 467
           PR+A M+L    L    L  A  L  LLEE     P R   D    L     R ++   P
Sbjct: 421 PRLAHMVLKGRDLRLGGL--ACDLAALLEERDVLRPGRDARDSDIRLRLDALRGRERGLP 478

Query: 468 KQKLLIQRAQSLA----HKLDTAFSLSSVDSAWLPLVACLAFPDRIAQQRGQQTGQFLLA 523
             K  + RA+  A     +L         D     L+   A+PDR+A++R     ++ + 
Sbjct: 479 VDKGGLARARQAARDGRRRLGLKAGEQEGDGRDAGLLLAFAYPDRLARRRPGGEPRYAMT 538

Query: 524 NGHGAWLAVEDRLSAADYLVALDLMRGQTQASQIFSALELDIHALERVLPALISRVEQVD 583
            G GA  A  + L+A ++L AL    G  + ++IF A  L +  +E    A I       
Sbjct: 539 GGGGAVFASHEPLAAEEWL-ALAETDGDRREARIFLAAPLTLAEIEEHFGAQIRSETLCR 597

Query: 584 WDEKAGRLSAEAQWRIDQLVLRREKLPEPDKQKMTQALLSYVRRKGLTVLQWSEDASEWL 643
           WD +   + A A+  +  LV+  + L   + + +  A+   VR+ G   L W+ D     
Sbjct: 598 WDGREEVVQARARRVLWSLVIEDKPLKSAEPEALCAAMAEGVRQMGPACLPWTPDLERLC 657

Query: 644 ARARCAAEWLPEEAWPALDDETLLARLELWLEPYLAGVTSVKGLQSVSVLQALKHYLGWE 703
            R        PE  WP L +  LLA LE WL PYL+G+T    L  + +  AL   L WE
Sbjct: 658 RRVAFVRGLDPEGGWPDLSEAALLAGLEDWLVPYLSGITRRAHLARLDLAAALSGLLSWE 717

Query: 704 LSQQLDEWLPTHHLLPTGNHKKIRYQLGMEPTLSVRMQEVFGEQSSPRVAKGTRAVVMEL 763
             ++LD+  PTH  +P+G+   I Y  G  P L+VR+QE+F    +PR+  G  A+++ L
Sbjct: 718 QKKRLDDLAPTHVEVPSGSRVPIDYS-GEVPVLAVRLQEMFACAETPRIGGGKVALLLHL 776

Query: 764 LSPAQRPLQVTRDLASFWAGAYKEVQKEMKGRYPKHVWPDDPANHVATSKTK 815
           LSPA+RP+QVTRDLASFWA  YK+V+ ++KG+YPKH WPDDP     T++ K
Sbjct: 777 LSPARRPMQVTRDLASFWANTYKQVKADLKGQYPKHWWPDDPMQAEPTARIK 828