Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 1300 a.a., ATP-dependent helicase (RefSeq) from Escherichia coli BW25113

 Score =  251 bits (641), Expect = 2e-70
 Identities = 162/483 (33%), Positives = 262/483 (54%), Gaps = 24/483 (4%)

Query: 4   LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAG-GFHGKIIMLEPRRLAAR 62
           LP+ +    +L  I +   +I+    G+GK+T  P   ++ G G  G I   +PRRLAAR
Sbjct: 77  LPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAAR 136

Query: 63  NIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIF 122
            +A  +A++L  E G  +GY+VR  + VS  T ++++T+GI+   +Q D  L   D +I 
Sbjct: 137 TVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIII 196

Query: 123 DEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGFP 182
           DE HERS++ D  L    E+    R DLKI++ SAT+D +        A  +E  GR +P
Sbjct: 197 DEAHERSLNIDFLLGYLKELLPR-RPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255

Query: 183 IEIRYQPL-----RSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQLSDL-A 236
           +E+RY+P+      ++   + A+   +  L Q   G +L F+ G   I    + L+ L  
Sbjct: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNL 315

Query: 237 SEVEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSAR 296
              EI PLY ++  + Q R +  + +GRR +VLATN+AETSLT+ GI+ V+D G  R +R
Sbjct: 316 RHTEILPLYARLSNSEQNR-VFQSHSGRR-IVLATNVAETSLTVPGIKYVIDPGTARISR 373

Query: 297 FDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDL 356
           +  +T + RL    I+Q+SA QR GR GR+  GIC+RLYSE     +P   +PE+L T+L
Sbjct: 374 YSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNL 433

Query: 357 APLALELAQWGAQPSDLA---WLNLPPSSAFAQAQQLLQRLGLLDARTQ-----ITAAGK 408
           A + L++   G    D+A   ++  P         +LL+ LG +    Q     +T  G+
Sbjct: 434 ASVILQMTALGL--GDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGR 491

Query: 409 EAHLLGVEPRIAAMLLSADRLGESALQSALALT--VLLEEPERQVIDVQHSLHRWQQGRH 466
           +   L V+PR+A M+L A + G   ++ A+ +T  + +++P  + +D Q +     +  H
Sbjct: 492 QLSQLPVDPRLARMVLEAQKHG--CVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH 549

Query: 467 PKQ 469
            K+
Sbjct: 550 DKE 552