Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 823 a.a., ATP-dependent helicase HrpB from Dickeya dianthicola ME23

 Score =  760 bits (1962), Expect = 0.0
 Identities = 416/838 (49%), Positives = 554/838 (66%), Gaps = 33/838 (3%)

Query: 1   MSPLPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHGKIIMLEPRRLA 60
           MS  P+  V+ +++  +  +PQ++L A  GAGKST+ PLQLLQ  GF G+IIMLEPRRLA
Sbjct: 1   MSLPPVSAVLDEVIRALHTAPQVLLHAPTGAGKSTWLPLQLLQRSGFPGRIIMLEPRRLA 60

Query: 61  ARNIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVL 120
           A+++A  LA+ LGE  GQ VGYR+R E+RVS  T+LE+VTEGI+TRMLQ+DP LDGV ++
Sbjct: 61  AKSVAFRLAEWLGETPGQTVGYRMRSESRVSSQTRLEVVTEGILTRMLQHDPALDGVSLV 120

Query: 121 IFDEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRG 180
           + DEFHERS+ AD ALAL L+VQ  LR+DLK+++MSATLD   L +LLPQ+  V SQGR 
Sbjct: 121 MLDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNSRLSSLLPQSLSVSSQGRS 180

Query: 181 FPIEIRYQPLRSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQLSD-LASEV 239
           +P+E  YQ + S E L  A  R +  LLQ ETGSLL FLPG A I +L   L + + +E 
Sbjct: 181 WPVERHYQSVGSQERLEEATARLVYRLLQDETGSLLVFLPGVAEIKRLQTLLENAVPAEA 240

Query: 240 EICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDL 299
           +ICPLYG +  A QQ+AI P AAGRRK+VLATNIAETSLTIEGIR+V+DSGLER   FD+
Sbjct: 241 DICPLYGALTLAEQQKAILPAAAGRRKIVLATNIAETSLTIEGIRVVVDSGLERVVLFDV 300

Query: 300 KTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDLAPL 359
           KTG+TRL   RI+Q+S  QRAGRAGRLEPG C  L++  Q ++     EPE+LH+DL+ L
Sbjct: 301 KTGLTRLTTQRISQASMVQRAGRAGRLEPGACWHLFAREQAERAAAQSEPEILHSDLSGL 360

Query: 360 ALELAQWGAQP-SDLAWLNLPPSSAFAQAQQLLQRLGLLDARTQITAAGKEAHLLGVEPR 418
            L+L QWG    + L WL+ PP  A   A +LL +LG+ DA+ ++TA G++   LG +PR
Sbjct: 361 RLDLLQWGCNDVAQLCWLDTPPQPALLAADRLLAQLGMRDAQQRLTADGRKMAALGCDPR 420

Query: 419 IAAMLLSADRLGESALQSALALTVLLEEPERQVIDVQHSLHR----WQQGRHPKQKLLIQ 474
           +AAML +A +  +    +AL   ++ E P     ++  +LHR    WQ+           
Sbjct: 421 LAAMLHAAGQDADVLATAALLAAIIEEPPRAGSPNLSDALHRPAGHWQR----------- 469

Query: 475 RAQSLAHKLDTAFSLSSVD-----------SAWLPLVACLAFPDRIAQQRGQQTGQFLLA 523
           RAQ LA ++  A    + D           +AWL       F DRIA++RGQ  G++ LA
Sbjct: 470 RAQQLARRVGKASGKVNADEVNAGKVNENLAAWL---LSAGFADRIARRRGQD-GRYQLA 525

Query: 524 NGHGAWLAVEDRLSAADYLVALDLMRGQTQA-SQIFSALELDIHALERVLPALISRVEQV 582
           NG GA L  ED L+A+++L+A  LM+    A ++I  AL +DI  L R  P L++    +
Sbjct: 526 NGSGASLPPEDALAASEWLLAPVLMQSPNNADARILLALPMDIDQLARQRPELVTEQNLM 585

Query: 583 DWDEKAGRLSAEAQWRIDQLVLRREKLPEPDKQKMTQALLSYVRRKGLTVLQWSEDASEW 642
            WDE+ G L A  + +I  L L    L +P  + + QA+L+++R +GL+VL W E A + 
Sbjct: 586 HWDEEKGTLRASLRTQIGSLTLSSRPLTKPSDEALQQAMLNWLREQGLSVLNWDEPALQL 645

Query: 643 LARARCAAEWLPEEAWPALDDETLLARLELWLEPYLAGVTSVKGLQSVSVLQALKHYLGW 702
             R  CA  WLPE AWPA+DD +LLA LE WL P L GV   + L  +++  AL   L W
Sbjct: 646 RQRLLCARRWLPEAAWPAVDDASLLASLERWLLPSLNGVRDRRTLHQINLSDALWRLLDW 705

Query: 703 ELSQQLDEWLPTHHLLPTGNHKKIRYQLGMEPTLSVRMQEVFGEQSSPRVAKGTRAVVME 762
              Q+LD  LP+H+  P G+   IRY   + P L+VR+QE+FGEQ SP +A+G  A+V+E
Sbjct: 706 SQRQRLDSALPSHYTAPGGSRLPIRYDADLPPVLAVRLQEMFGEQRSPLLAEGRVALVLE 765

Query: 763 LLSPAQRPLQVTRDLASFWAGAYKEVQKEMKGRYPKHVWPDDPANHVATSKTKRQLNA 820
           LLSPA RPLQ+TRDLA+FW GAY+EVQKEMKGRYPKHVWPDDPAN   T +T++  N+
Sbjct: 766 LLSPAMRPLQITRDLAAFWQGAYREVQKEMKGRYPKHVWPDDPANTAPTRRTRKYQNS 823