Pairwise Alignments

Query, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

Subject, 1295 a.a., ATP-dependent RNA helicase HrpA from Dickeya dianthicola ME23

 Score =  243 bits (619), Expect = 7e-68
 Identities = 159/467 (34%), Positives = 254/467 (54%), Gaps = 25/467 (5%)

Query: 4   LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAG-GFHGKIIMLEPRRLAAR 62
           LP+ +    +LS I +   +I+    G+GK+T  P   L+ G G  G I   +PRRLAAR
Sbjct: 73  LPVSQKREAILSAIRDHQVVIVAGETGSGKTTQLPKMCLELGRGVTGLIGHTQPRRLAAR 132

Query: 63  NIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIF 122
           ++A  +A +L   +G  VGY+VR  +++   T ++++T+GI+   +Q D  L   D LI 
Sbjct: 133 SVADRIAAELETPLGGAVGYKVRFNDQIGDNTLVKLMTDGILLAEIQQDRLLMQYDTLII 192

Query: 123 DEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGFP 182
           DE HERS++ D  L    ++    R DLK+++ SAT+D Q        A  +E  GR +P
Sbjct: 193 DEAHERSLNIDFILGYLRQLLPR-RPDLKVIITSATIDPQRFSRHFGNAPIIEVSGRTYP 251

Query: 183 IEIRYQPL-----RSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQLS--DL 235
           +++RY+P+       D   + AM   +  L +   G +L F+ G   I    + L+  DL
Sbjct: 252 VDVRYRPVVEEAQDGDRDQLQAMLDAVDELCREGPGDILVFMSGEREIRDTADALNKQDL 311

Query: 236 ASEVEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSA 295
               EI PLY ++    Q R +  +  GRR +VLATN+AETSLT+ GIR V+D G  R +
Sbjct: 312 P-HTEILPLYARLSNQEQNR-VFQSHHGRR-IVLATNVAETSLTVPGIRYVIDPGTARIS 368

Query: 296 RFDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTD 355
           R+  +T + RL    ++Q+SA QR GR GR+  GIC+RLYSE     +P   +PE+L T+
Sbjct: 369 RYSYRTKVQRLPIEPVSQASANQRKGRCGRVAAGICIRLYSEQDFLSRPAFTDPEILRTN 428

Query: 356 LAPLALELAQWGAQPSDLA---WLNLPPSSAFAQAQQLLQRLGLL----DARTQITAAGK 408
           LA + L++   G    D+A   +++ P         +LL+ L  L    D   ++T  G+
Sbjct: 429 LASVILQMTALGL--GDIAAFPFVDAPDKRNIQDGVRLLEELSALQSSDDGHYRLTPQGR 486

Query: 409 EAHLLGVEPRIAAMLLSADRLGESALQSALALTVLL--EEPERQVID 453
               L ++PR+A M+L A +   S ++ A+ +T  L  ++P  + ++
Sbjct: 487 HLAQLPIDPRLARMVLEARQ--TSCVREAMIITAALSIQDPRERPVE 531