Pairwise Alignments

Query, 148 a.a., RNA polymerase-binding transcription factor DksA from Vibrio cholerae E7946 ATCC 55056

Subject, 134 a.a., conjugal transfer protein TraR from Pseudomonas simiae WCS417

 Score = 76.3 bits (186), Expect = 2e-19
 Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 3/122 (2%)

Query: 24  PGEEYMSPGQITHFTKILEAWRNQLREEVDRTVHHMQDEAANFP-DPVDRASQEEEFSLE 82
           P ++YM+  Q   F K+L+  + +  E +++  + +  E+ + P DP D AS EEE +  
Sbjct: 10  PADDYMNAEQHAFFEKLLQDMKVEHHERIEQ--NRIAIESLDTPADPADAASVEEERTWL 67

Query: 83  LRNRDRERRLIKKIEKTLDKIKEEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIK 142
           +   DR++R++ ++E+ L++IKE+ FG+C+  G  IG++RL   PT   CI+ +   E  
Sbjct: 68  VNAIDRDQRMLPQLERALERIKEDSFGWCDDSGEPIGLKRLLISPTTKYCIEAQERHEQI 127

Query: 143 EK 144
           +K
Sbjct: 128 DK 129