Pairwise Alignments

Query, 148 a.a., RNA polymerase-binding transcription factor DksA from Vibrio cholerae E7946 ATCC 55056

Subject, 143 a.a., DksA family protein PA5536 (no Zn-finger) from Sphingobium sp. HT1-2

 Score =  102 bits (254), Expect = 2e-27
 Identities = 52/127 (40%), Positives = 79/127 (62%)

Query: 18  EPYQEKPGEEYMSPGQITHFTKILEAWRNQLREEVDRTVHHMQDEAANFPDPVDRASQEE 77
           + Y+    EE+M+P Q  +F + L  W+ Q+  E + T+  +Q+E    PD  DRAS E 
Sbjct: 12  DDYRPSADEEFMNPLQQEYFRQRLWDWKKQILSEAEGTLAVLQNEPLREPDLNDRASSET 71

Query: 78  EFSLELRNRDRERRLIKKIEKTLDKIKEEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 137
           ++S+ELR RDR+R+LI KI+  L +I E ++GYCE  G  I + RLEARP A + ++ + 
Sbjct: 72  DWSIELRTRDRQRKLISKIDAALRRIDEGEYGYCEVTGEPISLGRLEARPIATMTVEAQE 131

Query: 138 LAEIKEK 144
             E +EK
Sbjct: 132 RHERQEK 138