Pairwise Alignments

Query, 148 a.a., RNA polymerase-binding transcription factor DksA from Vibrio cholerae E7946 ATCC 55056

Subject, 141 a.a., RNA polymerase-binding protein DksA from Pseudomonas sp. S08-1

 Score = 82.4 bits (202), Expect = 3e-21
 Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 24  PGEEYMSPGQITHFTKILEAWRNQLREEVDRTVHHMQDEAANFPDPVDRASQEEEFSLEL 83
           P + YM+  Q   F ++L   R +L++ +D     ++ E     DPVD    EE+   +L
Sbjct: 11  PADTYMNELQQAFFHQLLLGQRIELQQRIDEEFGQLR-EPQPASDPVDLGCAEEQRQWQL 69

Query: 84  RNRDRERRLIKKIEKTLDKIKEEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIKE 143
           R  +RE+RL+ KI++ L+++   ++G+C   G  IG+RRL  RPTA LCI+ K   E +E
Sbjct: 70  RLLEREKRLLDKIDEALERLARGEYGWCSETGEPIGLRRLLLRPTASLCIEAKERQEQRE 129

Query: 144 KQM 146
           + +
Sbjct: 130 RHI 132