Pairwise Alignments

Query, 148 a.a., RNA polymerase-binding transcription factor DksA from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., C4-type zinc finger protein, DksA/TraR family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  112 bits (281), Expect = 5e-30
 Identities = 57/138 (41%), Positives = 84/138 (60%), Gaps = 1/138 (0%)

Query: 7   KTLGILAIAGVEPYQEKPGEEYMSPGQITHFTKILEAWRNQLREEVDRTVHHMQDEAANF 66
           KTL +  +  ++  Q  P  EYMS  Q+ +F + L   +  +      T  H++++    
Sbjct: 234 KTLPVDQLTDLD-VQAMPDSEYMSDLQLAYFRRKLSQLKADMLANAGETTEHLREDTVVV 292

Query: 67  PDPVDRASQEEEFSLELRNRDRERRLIKKIEKTLDKIKEEDFGYCESCGVEIGIRRLEAR 126
           PDP DRA+ EEE +LELR RDRER+L+KKIE+ + +I   D+GYCE  G  IG+ RL AR
Sbjct: 293 PDPADRATIEEEHALELRTRDRERKLLKKIEQAIARIDSGDYGYCEETGEPIGVGRLMAR 352

Query: 127 PTADLCIDCKTLAEIKEK 144
           PTA L ++ +   E+K+K
Sbjct: 353 PTASLSLEAQQRRELKQK 370