Pairwise Alignments

Query, 457 a.a., polynucleotide adenylyltransferase PcnB from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., 2', 3'-cyclic nucleotide 2'-phosphodiesterase from Pseudomonas simiae WCS417

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 74/308 (24%), Positives = 129/308 (41%), Gaps = 25/308 (8%)

Query: 53  FLVGGGVRDLLLGGKPKDFD-VATNATPEQLRQLFRNCRLIGRRFRLAHIMFGRDIVEVA 111
           + VGG VRD LLG    D D V   A+ E++  L +  + +G  F           V + 
Sbjct: 4   YKVGGAVRDRLLGIPVTDIDRVVVGASAEEM--LAKGYKPVGADFP----------VFLD 51

Query: 112 TFRGHHQESSQSQNIAAQSEAGMLLRDNVYGTIDEDAERRDFTINAMYYNIADYSIHDYA 171
              G     ++++  + +   G +   +   T++ED  RRD TINAM  +  D ++ D  
Sbjct: 52  PRNGDEYALARTERKSGRGYGGFVFHASPEVTLEEDLIRRDLTINAMAED-DDGNLTDPY 110

Query: 172 GGMEDLEDRLVRLIGDPETRYREDPVRMLRAVRFAVK---LDFDIEEDTAAPIEQLAPL- 227
            G  DLE R++R +      + EDP+R+LR  RFA +   L F +  +T   + QL+   
Sbjct: 111 HGQRDLEGRILRHV---SPAFAEDPLRVLRVARFAARYAHLGFTVAPETLELMRQLSESG 167

Query: 228 -LRDIPAARLYEESLKMLQAGHGLETYHLMRQYNLFQQLFPTIAEHFTADHSSKTEQMLD 286
            L  +   R ++E  + L          ++R+ +  + L P +   F     +     +D
Sbjct: 168 ELEALTPERSWKEISRALMEDQPQVFIQVLRECDALKTLMPEVDALFGVPQPAAHHPEID 227

Query: 287 LVLDATDIRVEEDLRINPAFMFAAMLWYPMIDLADRLMESLDLNEFDAITEASNRILDEV 346
             +    +  +  L   P  +  A L +   DL         L +  A      +++  V
Sbjct: 228 TGVHTLSVLEQAALHQQPLTVRWACLLH---DLGKGTTPMDKLPQHIAHEHRGLKLIKAV 284

Query: 347 VKRIAIPR 354
            +R  +PR
Sbjct: 285 NERFKVPR 292