Pairwise Alignments

Query, 457 a.a., polynucleotide adenylyltransferase PcnB from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., poly(A) polymerase from Pseudomonas simiae WCS417

 Score =  412 bits (1059), Expect = e-119
 Identities = 210/439 (47%), Positives = 303/439 (69%), Gaps = 5/439 (1%)

Query: 21  IIPRQEHPISRQQISENALKVLYRLHGAGFEAFLVGGGVRDLLLGGKPKDFDVATNATPE 80
           ++   +H + R Q S  A+ ++ RL  AG++A+LVGG VRD+LL   PKDFDVAT+ATPE
Sbjct: 25  VLNSSQHSLQRAQFSRYAVNIVERLQNAGYQAYLVGGCVRDMLLNITPKDFDVATSATPE 84

Query: 81  QLRQLFRNCRLIGRRFRLAHIMFGRDIVEVATFRGHHQESSQSQ--NIAAQSEAGMLLRD 138
           Q+R  FRN R+IGRRF+L HI FGR+I+EVATFR  H ++ + +  N ++++E+G +LRD
Sbjct: 85  QVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAGHPQNDEEEDTNQSSRNESGRILRD 144

Query: 139 NVYGTIDEDAERRDFTINAMYYNIADYSIHDYAGGMEDLEDRLVRLIGDPETRYREDPVR 198
           NVYGT++EDA+RRDFTINA+YY+     I DYA G+ D+ + L+RLIGDP  RY+EDPVR
Sbjct: 145 NVYGTLEEDAQRRDFTINALYYDPVSERILDYANGVHDIRNNLIRLIGDPVQRYQEDPVR 204

Query: 199 MLRAVRFAVKLDFDIEEDTAAPIEQLAPLLRDIPAARLYEESLKMLQAGHGLETYHLMRQ 258
           MLRAVRFA KL+F IE  TAAPI +LAP+LR+IP+ARL+EE LK+  +G+  +T+ ++  
Sbjct: 205 MLRAVRFAAKLNFGIERHTAAPIRELAPMLREIPSARLFEEVLKLFLSGYAADTFEMLVD 264

Query: 259 YNLFQQLFPTIAEHFTADHSSKTEQMLDLVLDATDIRVEEDLRINPAFMFAAMLWYPMID 318
             LF  LFP  AE     + + T  ++   L  TD+R++++  + PAF+FAA+LW  +  
Sbjct: 265 LQLFDPLFPASAEALEY-NPTYTHTLISEALINTDLRIKQNKPVTPAFLFAALLWPALPK 323

Query: 319 LADRLMESLDLNEFDAITEASNRILDEVVKRIAIPRRHTTTVRDIWQLQQRLPRRSGKRA 378
              RL E   +    A+ EA++ ++ E  +RIAIP+R T  +R+IW +Q+RLPRRSGKRA
Sbjct: 324 RVLRLQER-GMPPIPAMQEAAHELIAEQCQRIAIPKRFTMPIREIWDMQERLPRRSGKRA 382

Query: 379 FRLLELNKFRAGFDFLEMRGEIEGGETKQLAEWWATFQSAGRNMRQAMVGDIGNATGSSK 438
             LL+  +FRAG+DFL +R E  G +T  L EWW  +Q A  + R+ M+ ++G+      
Sbjct: 383 DLLLDNPRFRAGYDFLLLR-ESAGEQTDGLGEWWTDYQDANDSGRRDMIRELGSKGDGEG 441

Query: 439 SGARRRKPSRNKSKSKSSE 457
           +G ++R+ S  K K  S++
Sbjct: 442 AGPKKRRRSGTKRKRSSAD 460