Pairwise Alignments

Query, 457 a.a., polynucleotide adenylyltransferase PcnB from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., Poly(A) polymerase from Pseudomonas sp. S08-1

 Score =  417 bits (1071), Expect = e-121
 Identities = 220/455 (48%), Positives = 309/455 (67%), Gaps = 15/455 (3%)

Query: 12  RTYPDLALTIIPRQEHPISRQQISENALKVLYRLHGAGFEAFLVGGGVRDLLLGGKPKDF 71
           + +P     ++  ++H + R Q S NA+ V+ RL  AG++A+LVGG VRDLL+G +PKDF
Sbjct: 18  QAHPRSTPEVLGPRQHSLQRGQFSRNAVGVVDRLQKAGYQAYLVGGCVRDLLIGVQPKDF 77

Query: 72  DVATNATPEQLRQLFRNCRLIGRRFRLAHIMFGRDIVEVATFRGHHQESSQSQNI--AAQ 129
           DVAT+ATPEQ+R  FRN R+IGRRF+LAH+ FGR+I+EVATFR +H +    ++   +A+
Sbjct: 78  DVATSATPEQVRAEFRNARVIGRRFKLAHVHFGREIIEVATFRSNHPQGDDEEDSHQSAR 137

Query: 130 SEAGMLLRDNVYGTIDEDAERRDFTINAMYYNIADYSIHDYAGGMEDLEDRLVRLIGDPE 189
            E+G +LRDNVYGT++ DA+RRDFTINA+Y++++   + DYA G+ D+ +RL+RLIGDPE
Sbjct: 138 HESGRILRDNVYGTLESDAQRRDFTINALYFDVSGERVLDYAHGVHDIRNRLIRLIGDPE 197

Query: 190 TRYREDPVRMLRAVRFAVKLDFDIEEDTAAPIEQLAPLLRDIPAARLYEESLKMLQAGHG 249
            RY EDPVRMLRAVRFA KL F+IE+ +AAPI +LAP+LRDIPAARL+EE LK+  AG  
Sbjct: 198 QRYLEDPVRMLRAVRFAAKLGFEIEKHSAAPIRRLAPMLRDIPAARLFEEVLKLFLAGRA 257

Query: 250 LETYHLMRQYNLFQQLFPTIAEHFTADHSSKTEQMLDLVLDA---TDIRVEEDLRINPAF 306
             T+ L+ +Y+LF  LFP  A+    D     E   DL+  A   TD R+     + PAF
Sbjct: 258 ERTFELLVEYDLFAPLFPASAKALERD----PEYAGDLIRQALANTDERIALGKPVTPAF 313

Query: 307 MFAAMLWYPMIDLADRLMESLDLNEFDAITEASNRILDEVVKRIAIPRRHTTTVRDIWQL 366
           +FAA+LW P I      +++  +    A+ EA++ ++ E  KRIAIP+R T  +R+IW +
Sbjct: 314 LFAALLW-PAIPARAAQLQARGMPPIPAMQEAAHDLIVEQCKRIAIPKRFTIPIREIWDM 372

Query: 367 QQRLPRRSGKRAFRLLELNKFRAGFDFLEMRGEIEGGETKQLAEWWATFQSAGRNMRQAM 426
           Q+RLPRR GKRA  LLE  +FRAG+DFL +R E  G +T  L +WW  +Q A  + R++M
Sbjct: 373 QERLPRRQGKRADLLLENPRFRAGYDFLLLR-EDAGEQTDGLGDWWTDYQDASDSERRSM 431

Query: 427 VGDIGNATGSSKSGA----RRRKPSRNKSKSKSSE 457
           + ++GN       G     +RR+  RN+ +   SE
Sbjct: 432 IRELGNRQEEDGEGGAPARKRRRGGRNRRRGPRSE 466