Pairwise Alignments

Query, 457 a.a., polynucleotide adenylyltransferase PcnB from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., Poly(A) polymerase (EC 2.7.7.19) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  301 bits (772), Expect = 3e-86
 Identities = 177/463 (38%), Positives = 262/463 (56%), Gaps = 31/463 (6%)

Query: 8   PSNTRTYPDLALTIIPRQEHPISRQQISENALKVLYRLHGAGFEAFLVGGGVRDLLLGGK 67
           PS+ R  P      +P   H I R  + + AL V++ L  AGFEA+LVGG VRDLLLG +
Sbjct: 16  PSSRRANPFGKREDVPASVHGIDRSLVDQRALDVVHTLKQAGFEAYLVGGAVRDLLLGLR 75

Query: 68  PKDFDVATNATPEQLRQLFRNCRLIGRRFRLAHIMFGR----DIVEVATFRGHHQESSQS 123
           PKDFDVAT+ATPEQ++ LFR   +IGRRFR+ H+++GR    +++EV+TFR +   ++  
Sbjct: 76  PKDFDVATSATPEQVKGLFRRAFIIGRRFRIVHVVYGRGREHEVIEVSTFRAYLDNTAAE 135

Query: 124 Q----------NIAAQSEA----GMLLRDNVYGTIDEDAERRDFTINAMYYNIADYSIHD 169
           Q           +A    A    G +LRDNV+G I++DA RRDF+INAMYY+    ++ D
Sbjct: 136 QVAGNERTSKGELAGMKHAVDASGRVLRDNVWGPIEQDAARRDFSINAMYYDPETQTVVD 195

Query: 170 YAGGMEDLEDRLVRLIGDPETRYREDPVRMLRAVRFAVKLD---FDIEEDTAAPIEQLAP 226
           +  G+ D + R +R+IGD  TRYREDPVR++RAVRFA KL    F  +  T AP+     
Sbjct: 196 FHHGIRDAKKRTLRMIGDAATRYREDPVRIIRAVRFAAKLSGLGFTFDAKTLAPLASSRT 255

Query: 227 LLRDIPAARLYEESLKMLQAGHGLETYHLMRQYNLFQQLFPTIAEHFTADHSSKTEQMLD 286
           LL D+P +RL++E LK+LQ GH L +   ++   L   ++P +            +  + 
Sbjct: 256 LLADVPQSRLFDEMLKLLQTGHALASIEQLKAVGLGTGIYPLL----DIVVQRADDDFVK 311

Query: 287 LVLDATDIRVEEDLRINPAFMFAAMLWYPMIDLADRLMESLDLNE----FDAITEASNRI 342
           L L  TD RV E   + P+F+ A +LW  +    ++ +           F A+  A +  
Sbjct: 312 LALQDTDRRVSEGKPVAPSFLLACVLWADVRKAWNQHLTPRPNQRPPAPFAALQAAVDDA 371

Query: 343 LDEVVKRIAIPRRHTTTVRDIWQLQQRLPRRSGKRAFRLLELNKFRAGFDFLEMRGEIEG 402
            +  +  ++   +    +R+IW +Q R  +R G   F L+E  +FRAGFDFL +RG++ G
Sbjct: 372 FEARIGDVSGRGKLGADMREIWMMQPRFDKRVGTSPFSLVEQPRFRAGFDFLRLRGQV-G 430

Query: 403 GETKQLAEWWATFQSAGRNMRQAMVGDIGNATGSSKSGARRRK 445
              ++LA WW TF +A   MR+ MV D       +K GA + +
Sbjct: 431 EVEEELAHWWETFSTASDAMREDMV-DAQRRDNQAKPGASKAR 472