Pairwise Alignments

Query, 457 a.a., polynucleotide adenylyltransferase PcnB from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase (NCBI) from Escherichia coli BW25113

 Score = 73.9 bits (180), Expect = 9e-18
 Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 22/240 (9%)

Query: 53  FLVGGGVRDLLLGGKPKDFD-VATNATPEQLRQLFRNCRLIGRRFRLAHIMFGRDIVEVA 111
           +LVGG VRD LLG   KD D V   +TP+++  L    + +GR F +   +  +   E A
Sbjct: 4   YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPV--FLHPQTHEEYA 59

Query: 112 TFRGHHQESSQSQNIAAQSEAGMLLRDNVYGTIDEDAERRDFTINAMYYNIADYSIHDYA 171
             R   +  S        +   +        T+++D +RRD TINA+  +     I  Y 
Sbjct: 60  LARTERKSGSGYTGFTCYAAPDV--------TLEDDLKRRDLTINALAQDDNGEIIDPY- 110

Query: 172 GGMEDLEDRLVRLIGDPETRYREDPVRMLRAVRFAVK---LDFDIEEDTAAPIEQL--AP 226
            G+ DL++RL+R +      + EDP+R+LR  RFA +   L F I ++T A + ++  A 
Sbjct: 111 NGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167

Query: 227 LLRDIPAARLYEESLKMLQAGHGLETYHLMRQYNLFQQLFPTIAEHFTADHSSKTEQMLD 286
            L  +   R+++E+   L   +    + ++R     + LFP I   F     +K    +D
Sbjct: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227