Pairwise Alignments

Query, 457 a.a., polynucleotide adenylyltransferase PcnB from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca from Escherichia coli ECRC62

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 35/262 (13%)

Query: 53  FLVGGGVRDLLLGGKPKDFD-VATNATPEQLRQLFRNCRLIGRRFRLAHIMFGRDIVEVA 111
           +LVGG VRD LLG   KD D V   +TP+++  L    + +GR F +   +  +   E A
Sbjct: 4   YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPV--FLHPQTHEEYA 59

Query: 112 TFRGHHQESSQSQNIAAQSEAGMLLRDNVYGTIDEDAERRDFTINAMYYNIADYSIHDYA 171
             R   +  S        +   +        T+++D +RRD TINA+  +     I  Y 
Sbjct: 60  LARTERKSGSGYTGFTCYAAPDV--------TLEDDLKRRDLTINALAQDDNGEIIDPY- 110

Query: 172 GGMEDLEDRLVRLIGDPETRYREDPVRMLRAVRFAVK---LDFDIEEDTAAPIEQL--AP 226
            G+ DL++RL+R +      + EDP+R+LR  RFA +   L F I ++T   + ++  A 
Sbjct: 111 NGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLTLMREMTHAG 167

Query: 227 LLRDIPAARLYEESLKMLQAGHGLETYHLMRQYNLFQQLFPTIAEHF------------- 273
            L  +   R+++E+   L   +    + ++R     + LFP I   F             
Sbjct: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPARWHPEID 227

Query: 274 TADHSSKTEQMLDLVLDATDIR 295
           T  H+  T  M  ++    D+R
Sbjct: 228 TGIHTLMTLSMAAMLSPQVDVR 249