Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., Inner membrane transport permease YadH from Xanthobacter sp. DMC5

 Score =  200 bits (508), Expect = 3e-56
 Identities = 97/254 (38%), Positives = 161/254 (63%)

Query: 3   QIYWTAFCSLLGKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYMEYI 62
           Q+   A  ++   E+NR  R   Q++V P ++ +LYF++FG+ IGSR+ ++ G  Y  +I
Sbjct: 4   QVNLPAIRAIYTYEMNRTRRTIGQSIVSPVLSTSLYFVVFGSAIGSRMSEVGGVPYGAFI 63

Query: 63  VPGLIMMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGA 122
           VPGL+M++++T S SN A + +  +F   I ELL APV  + I+AGYV     + +L+G 
Sbjct: 64  VPGLMMLTLLTQSISNAAFAIYFPRFTGTIYELLSAPVSPFEIVAGYVGAAATKSVLLGL 123

Query: 123 MVTAVSLLFVDLQVDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTPLT 182
           ++ A + LFV ++V H   ++  + LT+V FSL G I  ++A  F+ + ++P  V+TPLT
Sbjct: 124 IILATAALFVPMEVRHPFWMLTFLVLTAVTFSLFGFIIGIWADGFERLQLIPMLVITPLT 183

Query: 183 YLGGVFYSISLLPEFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVALYC 242
           +LGG FYS+ +LP  W++V+  NP+VY+V  FR+ F G +DV +  S A+ +AF++A   
Sbjct: 184 FLGGTFYSLDMLPPVWRTVTLFNPVVYLVAGFRWSFFGTADVRVEVSAAMTLAFLIACLL 243

Query: 243 VAHYLVTKGKGLRS 256
           +  ++   G  L+S
Sbjct: 244 IVRWMFRTGYRLKS 257