Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., Efflux ABC transporter, permease protein from Sphingobium sp. HT1-2

 Score =  137 bits (345), Expect = 2e-37
 Identities = 71/255 (27%), Positives = 137/255 (53%), Gaps = 2/255 (0%)

Query: 4   IYWTAFCSLLGKEINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYMEYIV 63
           + W    +L  KE+ RF ++ +QT+  PA+T  ++ +IF   +G    Q+ G  + ++I 
Sbjct: 28  VNWAGMRALYRKEVRRFMKVQLQTIWAPAVTTLMFLVIFTIALGGANRQVLGVPFADFIA 87

Query: 64  PGLIMMSVITNSYSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGAM 123
           PGL+MM ++ N+++N + S  + K Q  + + L+ P+    ++   V   V R + VG  
Sbjct: 88  PGLMMMGMMNNAFANSSFSLLAGKMQGTLIDYLMPPLSVGELLLALVGAAVTRAVAVGLA 147

Query: 124 VTAVSLLFVDLQVD--HWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTPL 181
           +     L+  + V   H   +I    + + + +  G++ +++A+ FD  + +  FV+ P+
Sbjct: 148 LWGAMALWPGVHVTPTHLWAVIWFGLMGASLTAFIGVMTSIWAEKFDHAAAITNFVIGPM 207

Query: 182 TYLGGVFYSISLLPEFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVALY 241
           T L G FYSI  L   ++++S  NP  Y ++ FRYGF+  +D +++    VL+A    L 
Sbjct: 208 TLLSGTFYSIDRLSPLFRAISHANPFFYAISGFRYGFVAAADGNVLVGSVVLLALNAGLA 267

Query: 242 CVAHYLVTKGKGLRS 256
            + + L+ KG  L++
Sbjct: 268 VLCYVLLRKGWKLKA 282