Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., Efflux ABC transporter, permease protein from Sphingobium sp. HT1-2

 Score =  184 bits (467), Expect = 2e-51
 Identities = 93/228 (40%), Positives = 140/228 (61%), Gaps = 2/228 (0%)

Query: 16  EINRFTRIWVQTLVPPAITMTLYFIIFGNLIGSRIGQMNGFSYMEYIVPGLIMMSVITNS 75
           E++RF R W+  L+ P IT +LYFI+FG  IGSR+ Q++G  Y  +IVPGLIMMS+ T S
Sbjct: 16  ELHRFRRTWLTGLLVPVITTSLYFIVFGGAIGSRMTQIDGIPYAAFIVPGLIMMSMFTES 75

Query: 76  YSNVASSFFSSKFQKNIEELLVAPVPNYVIIAGYVMGGVARGLLVGAMVTAVSLLFVDLQ 135
             N +   +  KF   I ELL APV     +  YV     + L+VG ++ A + LFVDL 
Sbjct: 76  IFNASFGIYMPKFTGTIYELLSAPVSAMETVIAYVGAAATKALIVGFIIFATAHLFVDLP 135

Query: 136 VDHWGIIIATVFLTSVVFSLGGLINAVFAKTFDDISIVPTFVLTPLTYLGGVFYSISLLP 195
           V H   ++  + L +V F L G I  ++A+ F+ + ++P  ++TP+T+LGG FYSI +L 
Sbjct: 136 VAHPFAMVGFMLLIAVSFCLFGFILGIWAQGFEQLQVIPLLIITPMTFLGGAFYSIHMLA 195

Query: 196 EFWQSVSKINPIVYMVNAFRYGFLGVSDVDIMTSFAVLMAFVVALYCV 243
           E W++++  NPIVY+++ FR+ F G  DV I   F++L    +   C+
Sbjct: 196 EPWRTITLFNPIVYLISGFRWTFFGKGDVGI--EFSLLFVGGMLAVCL 241